LOC_Os07g49370

Expression Profile

RGAP LOCUS ID LOC_Os07g49370
RAP-DB ID Os07g0694400
Function glycosyltransferase family 43 protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization mito
score 9

2) CELLO Prediction
localization PlasmaMembrane
score 1.872

3) NUCPRED Prediction
localization Non Nuclear
score 0.43

4) Y-Loc Prediction
localization Chloroplast
score 7
confidence value 0.25
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsIRX9
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.124
NLS score -0.47
Protein Sequence >LOC_Os07g49370.1 protein
MASAGGCKKKTGNSRSRSPRSPVVLRRAMLHSSLCFLVGLLAGLAAPSDWPAAAGAAVFLRTLRASNVIFSRSSNRPQQPQLVVVVTTTEQSDDSERRAA
GLTRTAHALRLVSPPLLWLVVEEAPAEKHAAPPTARLLRRTGVVHRHLLMKQGDDDFSMQISMRREQQRNVALRHIEDHRIAGVVLFGGLADIYDLRLLH
HLRDIRTFGAWPVATVSAYERKVMVQGPLCINTSSSSVITRGWFDMDMDMAAGGERRAAADRPPPETLMEVGGFAFSSWMLWDPHRWDRFPLSDPDASQE
SVKFVQRVAVEEYNQSTTRGMPDSDCSQIMLWRIQTTL

GO Analysis
1
GO Category Biological Process
GO Term carbohydrate metabolic process
2
GO Category Molecular Function
GO Term transferase activity
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Cellular comBiological Processonent
GO Term Golgi apparatus
5
GO Category Biological Process
GO Term biosynthetic process
6
GO Category Biological Process
GO Term cellular process
Presence of Splice variants No