LOC_Os07g49330

Expression Profile

RGAP LOCUS ID LOC_Os07g49330
RAP-DB ID Os07g0694000
Function phospholipase C, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 6

2) CELLO Prediction
localization Cytoplasmic
score 2.588

3) NUCPRED Prediction
localization Non Nuclear
score 0.44

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.58
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPLC1
Function assigned as per literature OsPLC1 confers salt tolerance to rice
Subcellular localization as per literature cytoplasm
Cells used for localization experiment N. benthamiana leaves
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 28157263
Reference of localization https://nph.onlinelibrary.wiley.com/doi/full/10.1111/nph.14426
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.124
NLS score -0.13
Protein Sequence >LOC_Os07g49330.1 protein
MGTYKCCLIFKRRFRWNDAPPPDDVRALFANHSAGGGPHMAADGLRAYLQATGQDGDVDMERLVEQIRQLQGRGGRIPRVGRALPLLTVDDFHRFLFSHE
LNPPIRHGQGQVHHDMAAPLSHYFIYTGHNSYLTGNQLSSDCSDLPIIRALQRGVRVIELDMWPNSSKDDISILHGRTLTTPVSLLKCLLSIKQHAFEAS
PYPVIITLEDHLTPDLQDKAAKMVLEVFGDILYYPDKDHLKEFPSPQDLKGRVLLSTKPPREYLQAKDGNAATIKEDAKAAATDDAAWGKEVPDIHSQIH
SATKHDQREDDDDTDEDEDDEEEEQKMQQHLAPQYKHLITIKAGKPKGTLLDALQSDPEKVRRLSLSEQQLAKLADHHGTEIVRFTQRNLLRIYPKGTRV
TSSNYNPFLGWVHGAQMVAFNMQGYGRALWLMHGFYKANGGCGYVKKPDFLMQTDPEVFDPKKSLSPKKTLKVKVYMGDGWRMDFTQTHFDQYSPPDFYA
RVGIAGVPADSVMKRTRAIEDNWVPVWEEDFTFKLTVPEIALLRVEVHEYDMSEKDDFGGQTVLPVSDLIPGIRAVALHDRKGIKLNNVKLLMRFEFE

GO Analysis
1
GO Category Biological Process
GO Term signal transduction
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Molecular Function
GO Term hydrolase activity
4
GO Category Cellular comBiological Processonent
GO Term plasma membrane
5
GO Category Biological Process
GO Term lipid metabolic process
Presence of Splice variants YES