LOC_Os07g48640

Expression Profile

RGAP LOCUS ID LOC_Os07g48640
RAP-DB ID Os07g0685800
Function short-chain dehydrogenase/reductase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization mito
score 9

2) CELLO Prediction
localization Mitochondrial
score 2.213

3) NUCPRED Prediction
localization Non Nuclear
score 0.23

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.7
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSDR
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.115
NLS score -0.47
Protein Sequence >LOC_Os07g48640.1 protein
MAAAAAAASYSSTSWRVRPGLTPFRSPLQPHPQGRLQRIAIFATRIRIATPSAAMQSSSTRHRLEAVNHDHETIPERLAVVTGGNRGIGLEVCRQLALQG
VTVILTARDEKRGKDAVESLCHESNLSNIIFHQLDILDGNSRASLARYINSRFGKLDILVNNAGVGGVAVDQDGLRALNIDPRVWLSGKAVNLIQSVIVQ
TYDEAVKCLNTNYYGLKWITEALLPLLKQSPSGARIVNTTSLRSELKRIPNEKLRDELRNIDIWDEARIEAMLNEFLLDLKNERLEEAGWPTMLPAYSMS
KTVVNLYTRILAKRHPEMRINCVHPGFVNTEINWNTGIIPPEEGARGAVKAALLPQDGPTGCYFDQTELGEAW

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cytosol
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Molecular Function
GO Term catalytic activity
Presence of Splice variants YES