LOC_Os07g48630

Expression Profile

RGAP LOCUS ID LOC_Os07g48630
RAP-DB ID Os07g0685700
Function ethylene-insensitive 3, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 6

2) CELLO Prediction
localization Nuclear
score 2.751

3) NUCPRED Prediction
localization Non Nuclear
score 0.6

4) Y-Loc Prediction
localization Nuclear
score 99.91
confidence value 0.92
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category EIL

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsEIL2
Function assigned as per literature OsEIL2 and OsEIL1 regulate ethylene response of roots and coleoptiles and negatively affect salt tolerance in rice
Subcellular localization as per literature Nucleus
Cells used for localization experiment Arabidopsis protoplasts
NUCLEAR or Not Nuclear NUCLEAR
PMID 25995326
Reference of localization http://www.plantphysiol.org/content/169/1/148.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.108
NLS score 0.03
Protein Sequence >LOC_Os07g48630.1 protein
MMGAAVTMVDRRMAFAAEADVDSKAAFGFFGGECFVGEGDLVNPAPPPPQQQQVHEGGFAAEDESDGDDDDDDDDDVDDIEELERRMWRDRVRHKRLKEL
QQSRAGRESRAGDAGGGGRQQRQSQEQARRKKMSRAQDGILKYMLKMMEVCNAQGFVYGIIPEKGKPVSGASDNLRSWWKEKVRFDRNGPAAIAKYQADN
AVPGCDGDAGGAAPAGPHSLHELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPEGSEAWWPEAGVPKELGPPPYKKPHDLKKAWKVAVLTAVIKH
MSPDVDKVRRLVRQSKCLQDKMTAKEIVTWLAVLKQEEDLYLKLHPGALPPPLSAASFNASVSGEYDVEGVDGDEAGNNNLQKAQNDATAFMDLTTTMDA
ALSNNKFLIMPLMKEEAIDVDFIQKRSEPELMLSSDSHARVYTCGNVQCPHSNYALGFLDRNERNAHQYACKHNAAAAAAESKPPPPHIFEPLGSFDFDL
PVDGQRCLAGLMTMYDNDVAAATQMHHHHHQQQQANFFIRDDAPFGGDVAATAAAAPEFRFSSNFNVTGGGAVDYGGAMQQPPAKYAGSNWFY

GO Analysis
1
GO Category Biological Process
GO Term response to endogenous stimulus
2
GO Category Biological Process
GO Term signal transduction
3
GO Category Biological Process
GO Term biosynthetic process
4
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
5
GO Category Biological Process
GO Term response to stress
6
GO Category Biological Process
GO Term response to biotic stimulus
7
GO Category Molecular Function
GO Term sequence-specific DNA binding transcription factor activity
8
GO Category Biological Process
GO Term cellular process
Presence of Splice variants YES