LOC_Os07g48430

Expression Profile

RGAP LOCUS ID LOC_Os07g48430
RAP-DB ID Os07g0682800
Function nucleoside-triphosphatase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 7

2) CELLO Prediction
localization Mitochondrial
score 1.228

3) NUCPRED Prediction
localization Non Nuclear
score 0

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.15
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) rth1|OsAPY
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.12
NLS score -0.47
Protein Sequence >LOC_Os07g48430.1 protein
MRRYSALPGGGARPDTLADRLHRYRGVLLVILAPLALVSLVLLLMPRSPASSSAAAGRRWGPLDANKYAVIFDAGSSGSRVHVFRFDANLDLLHIGDQIE
LFVQKKPGLSEYANNPQEAAKSLVSLLEDAKRVVPVELRGQTPVRVGATAGLRALGAEKSEEILQAVRDLLREKSSFKTQPDWVTVLDGPQEGAYEWVTI
NYLLGKLGKTYADTVGVVDLGGGSVQMAYAIAEKDAVKAPKPSEGEDSYVKKLFLKGTTYYLYVHSYLHYGLLAARAEILKAGNGKGYSYCTLEGHQGQY
KYGNGKFEASASPSGASYSKCRDDVVKALKVDQACTHMKCSFGGIWNGGGGAGQKNLFVASFFFDRAAEAGFVNPKAPVAKVKPSDFEKAAKRACKLNLK
DAEAAYPGVQKDNIPYICMDLVYQYTLLVDGFGVGSHQEMTLVKKVPYSNAFVEAAWPLGSAIEVAS

GO Analysis
1
GO Category Biological Process
GO Term pollination
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Cellular comBiological Processonent
GO Term Golgi apparatus
4
GO Category Biological Process
GO Term catabolic process
5
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
6
GO Category Molecular Function
GO Term hydrolase activity
Presence of Splice variants YES