LOC_Os07g48229

Expression Profile

RGAP LOCUS ID LOC_Os07g48229
RAP-DB ID Os07g0680000
Function vacuolar-sorting receptor precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 5.5

2) CELLO Prediction
localization Extracellular
score 3.321

3) NUCPRED Prediction
localization Non Nuclear
score 0.03

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 1
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) VSR3|OsVSR3
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.112
NLS score -0.13
Protein Sequence >LOC_Os07g48229.1 protein
MTMMGCAVLLVVVASMAGEAAGRFVVEKNSLRVTSPAGLRGVYECAIGNFGMPQYGGTMHGVVVYPKANKKACRSFDDFDLSFKPKPGGLPIFLLVDRGD
CYFTTKGWNAQTAGAAAVLVADDRLEPLITMDSPESSGTDYIEKITVPSALVTKKFGDDLKKALENGDMVNVLLDWRESLPHPDERVEYEFWTNSNDECG
AKCDMQMNFVRNFRGTAQVLEKRGYTQFTPHYITWYCPEAFVLSKQCRSQCINHGRYCAPDPEQDFNIGYDGKDVVLQNLIQICLFKVGNETHKPWVWWD
YVHDFSIRCPMKEKKYTRECANGVIKSLGLDLERINKCVGDPEADEENPVLKAEQDAQIGQGSRGDVTILPTLVVNNKQYRGKLEKSAVLKAVCSGFEET
TEPDVCLSQEIQTNECLESNGGCWQDKTNNFTACKDTFRGRVCECPIARGVKFVGDGYTHCEASGVGRCQINNGGCWKETKNGKTVSACSNEESKGCKCP
PGFKGDGIKSCEDIDECKDKLFCQCKDCSCENTWGSYECSCGGSNMLYMREHDTCISKVASSSVGWGFLWVIFFGLALAGIGAYAVYKYRLRSYMDSEIR
AIMAQYMPLENQETPNQHRPVEHADI

GO Analysis
1
GO Category Biological Process
GO Term transport
2
GO Category Biological Process
GO Term cellular process
3
GO Category Cellular comBiological Processonent
GO Term Golgi apparatus
4
GO Category Molecular Function
GO Term binding
5
GO Category Cellular comBiological Processonent
GO Term plasma membrane
6
GO Category Molecular Function
GO Term protein binding
Presence of Splice variants No