LOC_Os07g47620

Expression Profile

RGAP LOCUS ID LOC_Os07g47620
RAP-DB ID Os07g0673400
Function universal stress protein domain containing protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 7

2) CELLO Prediction
localization Cytoplasmic
score 1.93

3) NUCPRED Prediction
localization Non Nuclear
score 0.04

4) Y-Loc Prediction
localization Cytoplasm
score 52
confidence value 0.52
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsUsp1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.099
NLS score -0.04
Protein Sequence >LOC_Os07g47620.1 protein
MAAAEGEQGKTVVVVGVDDSEHSNYALEWTMQHLASGMAGSGGAELVIVHAKPSPSSVVGFGAGPGSGEVVRYVEADLRKTAEDVVEKARRLCIANAMHA
LIEVIEGEPRYVLCNAVEKHSAGLLVVGSHGYGAIKRAFLGSVSDYCAHHAHCSVMIVKQPKAKRSRAETA

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Biological Process
GO Term response to stress
3
GO Category Cellular comBiological Processonent
GO Term vacuole
Presence of Splice variants No