LOC_Os07g47300

Expression Profile

RGAP LOCUS ID LOC_Os07g47300
RAP-DB ID Os07g0669200
Function spo0B-associated GTP-binding protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction

localization chlo
score 7

2) CELLO Prediction

localization Nuclear
score 1.021

3) NUCPRED Prediction

localization Non Nuclear
score 0.14

4) Y-Loc Prediction

localization Chloroplast
score 5
confidence value 0.02
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization

Published gene name (updated 1 January 2020) OsObgC1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis

Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.121
NLS score -0.47
Protein Sequence >LOC_Os07g47300.1 protein
MAPAVAVVAAAAAFPFRLFSAEARRNTKGSRSKRGSARPLKPSPPPRPSASSSAAGGGGATTFTRLPLRNAPASVEVTLDRFPTANPEPRASTFTRRNGE
RLGDDEEDEEEEEDEVELGLRGATTFARLPLRDSPDGGDLTIGHFDAGVAPQEGLRSRAISRQLVEHLDDVEEEEEEQVVSRLDIFEGAKGREARAFLPD
EDDEDDDVVVFDPEYDGYSDDEEFVATAVEQSPRGDAIAVAELEKLKYDNDDDDDDDDEVVVFHPDDDEEVDVFEDYDDDEEEETKEKGVPAVMRCFDTA
KIYAKAGDGGNGVVAFRREKYVPLGGPSGGDGGRGGNVFVEVDGDMNSLLPFRKSVHFRAGRGAHGQGRQQAGAKGDDVVVKVPPGTVVRSAAGDVELLE
LMRPGQRALLLPGGRGGRGNAAFKSGTNKAPRIAEKGEKGPEMWIDLELKLVADVGIVGAPNAGKSTLLTAISAAKPTIANYPFTTLLPNLGVVSLDFDA
TMVVADLPGLLEGAHRGYGLGHEFLRHSERCSVLVHVVDGSGEQPEYEFEAVRLELELFSPSLVDKPYIVVYNKMDLPEASERWNKFQEKLQAEGIEPYC
ISAMNRQGTEDVVLAAYKVLQKDRQRMKDDEEWNGPENLNHVADAIKRERRAPMNEFEIFHDKGTNTWNVVGAGIERFVQMTNWQYSESLKRFQHALEAC
GVNKTLIKRGVKEGDTVVVGEMEMVWTDEPSKTRSSKTMNSKDDSVRWPEFG

GO Analysis

1
GO Category Biological Process
GO Term catabolic process
2
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
3
GO Category Biological Process
GO Term response to abiotic stimulus
4
GO Category Cellular comBiological Processonent
GO Term membrane
5
GO Category Cellular comBiological Processonent
GO Term plastid
6
GO Category Molecular Function
GO Term hydrolase activity
7
GO Category Biological Process
GO Term embryo development
8
GO Category Biological Process
GO Term cellular component organization
9
GO Category Biological Process
GO Term cellular process
10
GO Category Biological Process
GO Term reproduction
11
GO Category Biological Process
GO Term post-embryonic development
Presence of Splice variants No