LOC_Os07g47100

Expression Profile

RGAP LOCUS ID

LOC_Os07g47100

RAP-DB ID

Os07g0666900

Function

transporter, monovalent cation:proton antiporter-2 family, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction

localization

plas

score

2) CELLO Prediction

localization

PlasmaMembrane

score

4.952

3) NUCPRED Prediction

localization

Non Nuclear

score

0.05

4) Y-Loc Prediction

localization

Cytoplasm

score

confidence value

0.59

Number Of Software Predicting Nucleus

Seed Specific

Transcription factor category

Experimental evidence for subcellular localization

Published gene name (updated 1 January 2020)

OsNHX1

Function assigned as per literature

OsNHX1 plays important role in the compartmentation of Na(+) and K(+) highly accumulated in the cytoplasm into the vacuoles, and the amount of the antiporter is one of the most important factors determining salt tolerance in rice.

Subcellular localization as per literature

Tonoplast

Cells used for localization experiment

rice cells

NUCLEAR or Not Nuclear

NOT NUCLEAR

PMID

14988485

Reference of localization

https://academic.oup.com/pcp/article/45/2/146/1814950

Is Subcellular localization evidence by author available ?

Sequence Analysis

Number of PAT4

Number of PAT7

Number of Bipartite

Basic residues %

0.071

NLS score

-0.47

Protein Sequence

>LOC_Os07g47100.2 protein
MGMEVAAARLGALYTTSDYASVVSINLFVALLCACIVLGHLLEENRWVNESITALIIGLCTGVVILLMTKGKSSHLFVFSEDLFFIYLLPPIIFNAGFQV
KKKQFFRNFMTITLFGAVGTMISFFTISIAAIAIFSRMNIGTLDVGDFLAIGAIFSATDSVCTLQVLNQDETPFLYSLVFGEGVVNDATSIVLFNALQNF
DLVHIDAAVVLKFLGNFFYLFLSSTFLGVFAGLLSAYIIKKLYIGRHSTDREVALMMLMAYLSYMLAELLDLSGILTVFFCGIVMSHYTWHNVTESSRVT
TKHAFATLSFIAETFLFLYVGMDALDIEKWEFASDRPGKSIGISSILLGLVLIGRAAFVFPLSFLSNLTKKAPNEKITWRQQVVIWWAGLMRGAVSIALA
YNKFTRSGHTQLHGNAIMITSTITVVLFSTMVFGMMTKPLIRLLLPASGHPVTSEPSSPKSLHSPLLTSMQGSDLESTTNIVRPSSLRMLLTKPTHTVHY
YWRKFDDALMRPMFGGRGFVPFSPGSPTEQSHGGR

GO Analysis

GO Category	Molecular Function
GO Term	transporter activity

GO Category	Biological Process
GO Term	transport

GO Category	Biological Process
GO Term	biological_process

GO Category	Biological Process
GO Term	cellular process

Presence of Splice variants

YES