LOC_Os07g46790

Expression Profile

RGAP LOCUS ID LOC_Os07g46790
RAP-DB ID Os07g0662900
Function 4-alpha-glucanotransferase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 10

2) CELLO Prediction
localization Cytoplasmic
score 2.422

3) NUCPRED Prediction
localization Non Nuclear
score 0.55

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.29
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsDPE2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.119
NLS score -0.16
Protein Sequence >LOC_Os07g46790.1 protein
MTNLSGKKSLNTVTLVFKLPYYTQWGQSLLIAGSEPALGSWNVKQGLSLSPVHQGNELIWSGRVSVATGFTCQYNYYVVDDNKNVLRSESGEKRKLVLPE
GVQDGDVVEIRDWWQDASEALFLRSAFKNVIFNGSENAKRELKTTSLNKSLEPEDIVVQFIVSCPRLGAGSTVVVTGSNPQLGRWQTQDGLKLNYVGDSI
WKANCLLRKSEFPIKYKYCKISEAGVSSLEFGPNREADVDLSSPKPSRYVLLSDGALRESPWRGAGVAVPIFSIRSNEDLGVGEFLDLKLLVDWAVNSGF
HLVQLLPINDTSVHGMWWDSYPYSSLSVFALHPLYLRVQALSDAIPGDIKDEISQAKKQLDKKDVDYEASLASKLSIARKIFKLEKDKVLNSSSFKQFLS
ENEEWLKPYAAFCFLRDFFETSDHSQWGRFSQFSKEKLDKLVSEGTLHHDVICFHYYIQYHLYMQLSEAAAYARKKKVILKGDLPIGVDRNSVDTWVYPT
LFRMNTATGAPPDYFDKNGQNWGFPTYNWEEMSKDNYGWWRARLTQMAKYFTAYRIDHILGFFRIWELPDHAATGLVGKFRPSIALSQEELLSEGLWDFD
RMSRPYILQETLEEKFGSFWTVIAANFLNEYKKQHYEFKEDCNTEKKIIAKLKNSSEKSLWLEKEDSIRRGLFDLLQNIVLIRDPEDSTKFYPRFNQEDT
SSFNDLDEHSKNILRRLYYDYYFARQENLWRQNALKTLPVLLNSSDMLACGEDLGLIPACVHPVMQELGLIGLRIQRMPSEPNLEFGIPSQYSYMTVCAP
SCHDCSTLRAWWEEDGGRRSRFYQTVIGSDDEPPSRCTPEVANFIVKQHFDAPSMWAIFPLQDLLALKDKYTTRPAKEETINDPTNPKHYWRFRLHVTLD
SLLDDKDIQATIKELVTSSGRSFPGKVDGAEESGEKLAKVQLNGKP

GO Analysis
1
GO Category Biological Process
GO Term carbohydrate metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term transferase activity
4
GO Category Biological Process
GO Term generation of precursor metabolites and energy
5
GO Category Molecular Function
GO Term carbohydrate binding
6
GO Category Cellular comBiological Processonent
GO Term cytosol
7
GO Category Biological Process
GO Term catabolic process
Presence of Splice variants No