LOC_Os07g46460

Expression Profile

RGAP LOCUS ID LOC_Os07g46460
RAP-DB ID Os07g0658400
Function ferredoxin-dependent glutamate synthase, chloroplast precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 14

2) CELLO Prediction
localization Chloroplast
score 2.66

3) NUCPRED Prediction
localization Non Nuclear
score 0.2

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.22
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) ABC1|OsFd-GOGAT|SPL32|ES7
Function assigned as per literature  ES7 is involved in nitrogen metabolism, effects chlorophyll synthesis, and may also associated with photorespiration, impacting leaf senescence in rice.
Subcellular localization as per literature Chloroplasts
Cells used for localization experiment rice protoplast cells and onion (Allium cepa) cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 28483051
Reference of localization https://www.sciencedirect.com/science/article/pii/S0168945216306549?via%3Dihub
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.108
NLS score 0.21
Protein Sequence >LOC_Os07g46460.1 protein
MATLPRAAAAAAPSPAAALLPLPRAAPLLAGRAAARSAARRLRARGTRAPPLAAARRGWGGVSPRAVLDLPRRREAAEKPAQKAADLNEILSERGACGVG
FVANLKNEPSFNIVRDALVALGCMEHRGGCGADNDSGDGSGLMSGIPWDLFNDWANKQGLAPLDRTNTGVGMVFLPQDENSMEEAKAVVAKVFTDEGLEV
LGWRTVPFNVSVVGRYAKETMPNIQQIFVKVAKEDNADDIERELYICRKLIERATKSASWADELYFCSLSSRTIVYKGMLRSEILGQFYLDLQNELYKSP
FAIYHRRYSTNTSPRWPLAQPMRLLGHNGEINTIQGNLNWMRSREATLQSPVWRGREHEIRPFGDPKASDSANLDSTAELLLRSGRSPAEAMMILVPEAY
KNHPTLSIKYPEVIDFYDYYKGQMEAWDGPALLLFSDGRTVGACLDRNGLRPARYWRTSDDFVYVASEVGVIPMDESKVVMKGRLGPGMMITVDLQTGQV
LENTEVKKSVASANPYGSWLQQSTRSIKPVNFQSSVAMDNETVLRHQQAFGYSSEDVQMVIETMASQGKEPTFCMGDDIPLAVLSQKPHMLFDYFKQRFA
QVTNPAIDPLREGLVMSLEVNIGKRRNILEVGPENADQVTLSSPVLNEGELESLLNDSKLKPKVLSTYFDIRKGLDGSLDKAIKVLCDEADAAVRNGSQL
LVLSDRSEALEPTRPAIPILLAVGAIHQHLIQNGLRMSASIVADTAQCFSTHQFACLIGYGASAICPYLALETCRQWRLSNKTVNLMRNGKMPTVTIEQA
QRNFIKAVKSGLLKILSKMGISLLSSYCGAQIFEIYGLGQEVVDLAFCGSVSKIGGLTLDELGRETLSFWVKAFSEDTAKRLENFGFIQSRPGGEYHANN
PEMSKLLHKAVREKSDNAYTVYQQHLASRPVNVLRDLLELKSDRAPIPIGKVEPATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDP
IRWSPLADVEDGYSPTLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLVNAEQIEIKIAQGAKPGEGGQLPGKKVSAYIARLRNSKPGVPLISPPPHHDI
YSIEDLAQLIYDLHQINPKAKVSVKLVAEAGIGTVASGVSKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLSETHQTLIQNGLRERVVLRVDGGFR
SGLDVLMAAAMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNYFLFVAEEVRATLAQLGFEKLDDIIGRTDILKAKHVS
LAKTQHIDLKYLLSSAGLPKWSSSQIRSQDVHSNGPVLDETILADPDISDAIENEKEVSKTFQIYNVDRAVCGRVAGVIAKKYGDTGFAGQLNITFTGSA
GQSFGCFLTPGMNIRLVGEANDYVGKGMAGGELVVVPVEKTGFVPEDAAIVGNTCLYGATGGQVFVRGKTGERFAVRNSLGQAVVEGTGDHCCEYMTGGC
VVVLGKVGRNVAAGMTGGLAYILDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSEKGATILREWEAYLPLFWQLVPPSEEDSPEACAEF
ERVLAKQATTVQSAK

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Cellular comBiological Processonent
GO Term extracellular region
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Biological Process
GO Term cellular process
5
GO Category Biological Process
GO Term response to abiotic stimulus
6
GO Category Molecular Function
GO Term catalytic activity
7
GO Category Molecular Function
GO Term protein binding
8
GO Category Cellular comBiological Processonent
GO Term plastid
9
GO Category Cellular comBiological Processonent
GO Term mitochondrion
10
GO Category Biological Process
GO Term biosynthetic process
Presence of Splice variants No