LOC_Os07g46310

Expression Profile

RGAP LOCUS ID LOC_Os07g46310
RAP-DB ID Os07g0656500
Function magnesium-chelatase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 10

2) CELLO Prediction
localization Cytoplasmic
score 2.559

3) NUCPRED Prediction
localization Non Nuclear
score 0.43

4) Y-Loc Prediction
localization Cytoplasm
score 55
confidence value 0.26
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) chlH
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.112
NLS score -0.47
Protein Sequence >LOC_Os07g46310.1 protein
MATMLRVFQTQLTAEALIEEVIHDKEAQFNSPNLNVAYRMNVREYQSLTSYASLLEENWGKPPGNLISDGEKPTCLWETFMPGKQVGMSDACYPDSLIGN
IPNIYCYAANNPSEATVGKRRSYANTISYLTPPAENVGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQLILTRMFPLPEERMELPPNERDLIV
GKVYAKIMEIESRLLPCGLHVIGEPPSAIEAVATLVNIASLDCPEDEIYSLPNILAQTVGRNIEDVYRGSDKGILADVELLRQITEASRGAITAFVERTT
NSKGQVVDVTNKLSTMLGFGLSEPWVQHLSKTKFIRADREKLRTLFTFLGECLKLIVADNELGSLKLALEGSYVEPGPGGDPIHNLKVLPTGKSIHALDP
QTMPTIAAMKSAKIVVDRLLEWQKVDNGGKYPETIALVLWGTDNIKTNGESLAQVLWMIGVRSVADTFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDL
FINQTNLLDRAVKMVAELDEPEEMNYVRKHAQEQAQELGVSLREATTRVFSNASGSYSSNVNLAVENASWTDEKQLQDMYLSRKSFAFDSDAPGAGMREQ
RKTFELALATADATFQNLDSSEISLTDVSHYFDSDPTKLVQGLRKDERAPSSYIADTTTANAQVRTLSETVRLDARTKLLNPKWYKGMMKSGYEGVREIE
KRLTKTVVWSAKSGQVVNWVYEEANATFIEDEAMRKRLMDTNPNSFRKLVQTCLEASGRG

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term plastid
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Biological Process
GO Term biosynthetic process
4
GO Category Molecular Function
GO Term catalytic activity
5
GO Category Cellular comBiological Processonent
GO Term mitochondrion
6
GO Category Cellular comBiological Processonent
GO Term membrane
7
GO Category Biological Process
GO Term cellular process
Presence of Splice variants No