LOC_Os07g44350

Expression Profile

RGAP LOCUS ID LOC_Os07g44350
RAP-DB ID Os07g0637400
Function sec20 domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 5

2) CELLO Prediction
localization Nuclear
score 3.73

3) NUCPRED Prediction
localization Non Nuclear
score 0.49

4) Y-Loc Prediction
localization Nuclear
score 99.5
confidence value 0.98
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsNPSN13
Function assigned as per literature OsNPSN13 may be involved in the signal transduction in responses to abiotic stresses
Subcellular localization as per literature Plasma membranes
Cells used for localization experiment Plasmolyzed onion epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 18197419
Reference of localization https://link.springer.com/article/10.1007%2Fs00438-007-0313-2
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 1
Basic residues % 0.15
NLS score 0.02
Protein Sequence >LOC_Os07g44350.1 protein
MASDVPMSPELEQVDGEIQDIFRALQNGFQKMDKIKDSNRQSKQLEDLTGKMRECKRLIKEFDRILKEDEKKNSADVNKQLNDKKQLMIKELNSYVTLRK
TYQSSLGNKRIELFDTGNDQVAEDNTVQMASEMSNQQLMDAGRKQMDQTDQVIERSKKVVAQTVEVGSQTAAALSQQTEQMKRIGNELDSVHFSLKKASQ
MVKEIGRQVATDKCIMAFLFLIVCGVIAIIVVKIVNPHNKNIRDIPGLAPPAQNRKLLSIESFGSL

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No