LOC_Os07g42940

Expression Profile

RGAP LOCUS ID LOC_Os07g42940
RAP-DB ID Os07g0622000
Function CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cysk
score 5.5

2) CELLO Prediction
localization Nuclear
score 1.992

3) NUCPRED Prediction
localization Non Nuclear
score 0.1

4) Y-Loc Prediction
localization Cytoplasm
score 99
confidence value 0.9
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) SAPK2|OsSAPK2
Function assigned as per literature SAPK2 functions in regulating ABA-dependent gene expression
Subcellular localization as per literature Cytosol and the nucleus but upon interaction with OsPP2C30 and OREB1, SAPK2 moves to nucleus
Cells used for localization experiment Tobacco epidermis cells and rice protoplasts
NUCLEAR or Not Nuclear NUCLEAR
PMID 22071266
Reference of localization https://academic.oup.com/jxb/article/63/2/1013/508766
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.115
NLS score -0.47
Protein Sequence >LOC_Os07g42940.1 protein
MERYEVIKDIGSGNFGVAKLVRDVRTKELFAVKFIERGQKIDENVQREIMNHRSLRHPNIVRFKEVVLTPTHLAIVMEYAAGGELFERICSAGRFSEDEA
RFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSIAPRLKICDFGYSKSSLLHSQPKSTVGTPAYIAPEVLARKEYDGKVADVWSCGVTLYVMLVGAYPF
EDPDEPRNFRKTITRILSVQYMVPDYVRVSMECRHLLSRIFVANPEQRITIPEIKNHPWFLKNLPIEMTDEYQMSVQMNDINTPSQGLEEIMAIIQEARK
PGDGSKFSGQIPGLGSMELDDVDTDDIDVEDSGDFVCAL

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Biological Process
GO Term response to endogenous stimulus
4
GO Category Biological Process
GO Term signal transduction
5
GO Category Biological Process
GO Term response to stress
6
GO Category Biological Process
GO Term response to abiotic stimulus
7
GO Category Biological Process
GO Term response to biotic stimulus
8
GO Category Cellular comBiological Processonent
GO Term cytoplasm
9
GO Category Molecular Function
GO Term protein binding
10
GO Category Biological Process
GO Term biosynthetic process
11
GO Category Biological Process
GO Term lipid metabolic process
12
GO Category Cellular comBiological Processonent
GO Term cytosol
13
GO Category Molecular Function
GO Term kinase activity
14
GO Category Cellular comBiological Processonent
GO Term nucleus
15
GO Category Biological Process
GO Term protein modification process
16
GO Category Biological Process
GO Term carbohydrate metabolic process
17
GO Category Biological Process
GO Term growth
18
GO Category Biological Process
GO Term multicellular organismal development
Presence of Splice variants YES