LOC_Os07g42370

Expression Profile

RGAP LOCUS ID LOC_Os07g42370
RAP-DB ID Os07g0615200
Function zinc-finger protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 12

2) CELLO Prediction
localization Nuclear
score 2.007

3) NUCPRED Prediction
localization Non Nuclear
score 0.49

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.09
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category Tify

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsJAZ7|OsTIFY10b
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.127
NLS score -0.47
Protein Sequence >LOC_Os07g42370.1 protein
MAASARPVGVGGERATSFAMACSLLSRYVRQNGAAAAELGLGIRGEGEAPRAAPATMSLLPGEAERKKETMELFPQSAGFGQQDAITADSAADAREQEPE
KRQLTIFYGGKVLVFNDFPADKAKGLMQLASKGSPVAPQNAAAPAPAAVTDNTKAPMAVPAPVSSLPTAQADAQKPARANASDMPIARKASLHRFLEKRK
DRLNAKTPYQASPSDATPVKKEPESQPWLGLGPNAVVKPIERGQ

GO Analysis
1
GO Category Biological Process
GO Term response to stress
2
GO Category Molecular Function
GO Term protein binding
3
GO Category Biological Process
GO Term response to endogenous stimulus
Presence of Splice variants YES