LOC_Os07g40290

Expression Profile

RGAP LOCUS ID LOC_Os07g40290
RAP-DB ID Os07g0592600
Function OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 7

2) CELLO Prediction
localization PlasmaMembrane
score 1.12

3) NUCPRED Prediction
localization Non Nuclear
score 0.13

4) Y-Loc Prediction
localization Cytoplasm
score 95
confidence value 0.78
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsGH3.8|OsGH3-8|OsMGH3
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.104
NLS score -0.47
Protein Sequence >LOC_Os07g40290.1 protein
MAVMTDVSTTGTALRTPAAGAVKEGDVEKLRFIDEMTTNVDAVQERVLGEILGRNAGTEYLTKCGLDGATDRAAFRAKVPVVSYDDLQPYIQRIANGDRS
PILSTHPVSEFLTSSGTSAGERKLMPTIMDELDRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFVKSETKTPGGLTARPVLTSYYKSDHFKNRPYDPYHNY
TSPTAAILCADAFQSMYAQMVCGLCQRNDVLRLGAVFASGLLRAIRFLQLNWEQLADDIESGELTPRVTDPSVREAVAAILLPDPELAKLIRAECSKGDW
AGIITRVWPNTKYLDVIVTGAMAQYIPTLEFYSGGLPMACTMYASSECYFGLNLRPMCDPSEVSYTIMPNMGYFEFLPVDETGAASGDATQLVDLARVEV
GREYELVITTYAGLNRYRVGDVLRVTGFHNAAPQFRFVRRKNVLLSIESDKTDEAELQRAVERASALLRPHGASVVEYTSQACTKRIPGHYVIYWELLTK
GAGATVVDADTLGRCCLEMEEALNTVYRQSRVADGSIGPLEIRVVRPGTFEELMDYAISRGASINQYKVPRCVTFPPIVELLDSRVVSSHFSPALPHWTP
ARRSE

GO Analysis
1
GO Category Biological Process
GO Term response to endogenous stimulus
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Molecular Function
GO Term catalytic activity
4
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No