LOC_Os07g40260

Expression Profile

RGAP LOCUS ID LOC_Os07g40260
RAP-DB ID Os07g0592200
Function eukaryotic aspartyl protease domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 8

2) CELLO Prediction
localization Extracellular
score 1.038

3) NUCPRED Prediction
localization Non Nuclear
score 0.28

4) Y-Loc Prediction
localization Chloroplast
score 6
confidence value 0.56
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsAP65
Function assigned as per literature OsAP65 was essential for rice pollen germination and tube growth
Subcellular localization as per literature Pre vacuolar compartment (PVC)
Cells used for localization experiment Arabidopsis protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 23918968
Reference of localization https://academic.oup.com/jxb/article/64/11/3351/486283
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.09
NLS score -0.47
Protein Sequence >LOC_Os07g40260.1 protein
MASRRSRRLGSLVPFAAAVVLLLLIASAAAAAAGSPDRAGPARPPLVLPLTLAYPNATRLPASSARRGLGDGHNPNARMRLHDDLLTNGYYTTRLYIGTP
SQEFALIVDSGSTVTYVPCATCEQCGNHQDPRFQPDLSSTYSPVKCNVDCTCDNERSQCTYERQYAEMSSSSGVLGEDIMSFGKESELKPQRAVFGCENT
ETGDLFSQHADGIMGLGRGQLSIMDQLVEKGVISDSFSLCYGGMDVGGGTMVLGGMPAPPDMVFSHSNPVRSPYYNIELKEIHVAGKALRLDPKIFNSKH
GTVLDSGTTYAYLPEQAFVAFKDAVTNKVNSLKKIRGPDPNYKDICFAGAGRNVSQLSEVFPDVDMVFGNGQKLSLSPENYLFRHSKVEGAYCLGVFQNG
KDPTTLLGGIVVRNTLVTYDRHNEKIGFWKTNCSELWERLHISEVPSSAPSDSEGDMAPAPAPSGLPEFDVGLITVDMSINVTYPNLKPHLHELAELIAK
ELDIDSRQVRVMNVTSQGNSTLIRWGIFPAGPSNSMTNTTAMGIIYRLTQHHVQLPENLGSYQLLEWNVQPLSKRSWFRDHVVSILLGILLVVLLTLSAL
LVLIVWRKKFRGQAAYRPVDSAVPEQELQPL

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Biological Process
GO Term protein metabolic process
3
GO Category Molecular Function
GO Term hydrolase activity
Presence of Splice variants YES