LOC_Os07g40240

Expression Profile

RGAP LOCUS ID LOC_Os07g40240
RAP-DB ID Os07g0592000
Function GASR9 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 14

2) CELLO Prediction
localization Extracellular
score 3.52

3) NUCPRED Prediction
localization Non Nuclear
score 0.11

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.96
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsGASR9
Function assigned as per literature OsGASR9 positively regulates grain size and yield in rice.
Subcellular localization as per literature Plasma membrane, cytoplasm and nucleus
Cells used for localization experiment Rice protoplasts
NUCLEAR or Not Nuclear NUCLEAR
PMID 31300138
Reference of localization https://www.sciencedirect.com/science/article/pii/S0168945218312044
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.137
NLS score 0.21
Protein Sequence >LOC_Os07g40240.1 protein
MRVPPLRATTALLATLLVAASFQDLTVAADGGGGVVPVPDSVCDAKCQKRCSLKVAGRCMGLCKMCCHDCGGCVPSGPYASKDECPCYRDMVSPKSRRPK
CP

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Molecular Function
GO Term molecular_function
3
GO Category Biological Process
GO Term response to endogenous stimulus
Presence of Splice variants No