LOC_Os07g39220

Expression Profile

RGAP LOCUS ID LOC_Os07g39220
RAP-DB ID Os07g0580500
Function BES1/BZR1 homolog protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 14

2) CELLO Prediction
localization Nuclear
score 3.632

3) NUCPRED Prediction
localization Non Nuclear
score 0.67

4) Y-Loc Prediction
localization Nuclear
score 53.72
confidence value 0.15
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category BES1

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsBZR1
Function assigned as per literature OsBZR1 along with 14-3-3 proteins function in brassinosteroid signaling in rice
Subcellular localization as per literature Nucleus and cytoplasm but binding by 14-3-3 Proteins Reduces the Nuclear Localization of OsBZR1
Cells used for localization experiment Tobacco leaf epidermal cells or in stably transformed Arabidopsis plants
NUCLEAR or Not Nuclear NUCLEAR
PMID 17699623
Reference of localization http://www.pnas.org/content/104/34/13839.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 3
Number of Bipartite 0
Basic residues % 0.117
NLS score 0.96
Protein Sequence >LOC_Os07g39220.1 protein
MTSGAAAAGRTPTWKERENNKRRERRRRAIAAKIFTGLRALGNYNLPKHCDNNEVLKALCREAGWVVEDDGTTYRKGCKPPPSSAGGASVGMSPCSSTQL
LSAPSSSFPSPVPSYHASPASSSFPSPSRIDNPSASCLLPFLRGLPNLPPLRVSSSAPVTPPLSSPTASRPPKIRKPDWDVDPFRHPFFAVSAPASPTRG
RRLEHPDTIPECDESDVSTVDSGRWISFQMATTAPTSPTYNLVNPGASTSNSMEIEGTAGRGGAEFEFDKGRVTPWEGERIHEVAAEELELTLGVGAK

GO Analysis
1
GO Category Biological Process
GO Term biosynthetic process
2
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
3
GO Category Biological Process
GO Term biological_process
4
GO Category Cellular comBiological Processonent
GO Term vacuole
Presence of Splice variants No