LOC_Os07g38600

Expression Profile

RGAP LOCUS ID LOC_Os07g38600
RAP-DB ID Os07g0573600
Function REX1 DNA Repair family protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 8

2) CELLO Prediction
localization Nuclear
score 2.8

3) NUCPRED Prediction
localization Non Nuclear
score 0.46

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.08
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsREX1-S
Function assigned as per literature OsREX1-S renders plant cells tolerant to cadmium- and UV-induced damage by enhancing DNA excision repair
Subcellular localization as per literature Nucleus
Cells used for localization experiment Onion epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 24563249
Reference of localization https://link.springer.com/article/10.1007%2Fs00425-014-2042-1
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 1
Basic residues % 0.13
NLS score 0.02
Protein Sequence >LOC_Os07g38600.1 protein
MPDLRLRSSALSRAPPPPPLQAPCSSPVCSYRSVQRRTGAREDNSTGRRQRWHSVLQRAENMVNAIKGLFISCDVPMAQFIVNLNASMPASDKFILHMLD
PTHMFVQPHVAEMIRSKISEFRDQNSYEKPT

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Molecular Function
GO Term DNA binding
3
GO Category Biological Process
GO Term response to stress
4
GO Category Biological Process
GO Term DNA metabolic process
Presence of Splice variants No