LOC_Os07g38240

Expression Profile

RGAP LOCUS ID LOC_Os07g38240
RAP-DB ID Os07g0569700
Function ZOS7-05 - C2H2 zinc finger protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 14

2) CELLO Prediction
localization Nuclear
score 3.398

3) NUCPRED Prediction
localization Non Nuclear
score 0.69

4) Y-Loc Prediction
localization Nuclear
score 96.97
confidence value 0.84
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category C2H2

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSAP16
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.124
NLS score -0.16
Protein Sequence >LOC_Os07g38240.1 protein
MGTPEFPNLGKHCSVGDCNQIDFLPFTCDRCDHVFCLQHRSYTSHQCPNANQKDVTVLICPLCAKGVRLNPNEDPNITWDTHVNSDCDPSNYQKVTKKKK
CPVPGCRETLTFSNTIRCKDCTKEHCLKHRFGPDHKCPGPRKPESTFPFGNMLRRSQKAESCSNSNSSSTSSSWWSSSLLTAATSFKSSAEAGMQKLSTA
TTQAIQKAKDGISTSSSNSGDLVEQCVQCPARFSTVGALIEHCEKSHQSNSQSSRSRVTVDVCPKCSKAFRDPVLLVEHVERDHGGTSRA

GO Analysis
1
GO Category Molecular Function
GO Term binding
2
GO Category Cellular comBiological Processonent
GO Term intracellular
3
GO Category Biological Process
GO Term biological_process
4
GO Category Molecular Function
GO Term nucleic acid binding
Presence of Splice variants No