LOC_Os07g38170

Expression Profile

RGAP LOCUS ID LOC_Os07g38170
RAP-DB ID Os07g0569100
Function remorin, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 12

2) CELLO Prediction
localization Nuclear
score 1.912

3) NUCPRED Prediction
localization Non Nuclear
score 0.62

4) Y-Loc Prediction
localization Nuclear
score 99.95
confidence value 0.96
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsREM4.1
Function assigned as per literature OsREM4.1 is egulated by ABA signal and plays a role in modulating BR signaling output
Subcellular localization as per literature plasma membrane
Cells used for localization experiment Rice protoplasts or tobacco-leaf cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 27424498
Reference of localization https://www.cell.com/developmental-cell/fulltext/S1534-5807(16)30380-X
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 0
Number of Bipartite 1
Basic residues % 0.149
NLS score 0.52
Protein Sequence >LOC_Os07g38170.1 protein
MLSEQTAASGSSSSSRGADDREIVISTGREIVVRSSGGEEREEEVVVEEELEEPEFRDIHALSPPPTPTPSQPSSSYHRRRRESWESAAGSRHTSIRSVG
SDTAPSELFPTMSREFSAMVAAAANANAAAAAAANGGDSSRAGVDDALGRIGEDELEETNPLAIVPDSNPIPSPRRAHLALPAPGDVSSAGGGHGDEVSV
GQVKKEEVESKIAAWQIAEVAKVNNRFKREEVVINGWEGDQVEKANAWLKKYERKLEEKRAKAMEKAQNEVAKARRKAEEKRASAEAKRGTKVARVLELA
NFMRAVGRAPSKRSFF

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Molecular Function
GO Term DNA binding
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No