LOC_Os07g37320

Expression Profile

RGAP LOCUS ID LOC_Os07g37320
RAP-DB ID Os07g0559700
Function transporter family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 6

2) CELLO Prediction
localization PlasmaMembrane
score 4.9

3) NUCPRED Prediction
localization Non Nuclear
score 0.1

4) Y-Loc Prediction
localization Cytoplasm
score 54
confidence value 0.25
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsMST6
Function assigned as per literature OsMST6 is a broad-spectrum monosaccharide transporter
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment onion epidermal cells and rice protoplast
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 18506478
Reference of localization https://link.springer.com/article/10.1007/s00425-008-0755-8
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.085
NLS score -0.47
Protein Sequence >LOC_Os07g37320.1 protein
MAGGVVVNNGGGKDYPGKLTMFVLFACIVAATGGLIFGYDIGISGGVTSMNPFLIKFFPSVYRKEQAAEKNQSNQYCKFDSPLLTMFTSSLYLAALVASF
FASTVTRVAGRKWSMFGGGVTFLVGAALNGAAKNVLMLILGRVLLGVGVGFANQSVPLYLSEMAPARLRGMLNIGFQLMITIGILCANLINYGTAKIKGG
WGWRVSLALAAVPAAIIAVGALFLPDTPNSLIDRGHTDAAKRMLRRVRGTDDIEEEYNDLVAASEESKLVAHPWRNILQRRYRPQLTMAIAIPLFQQLTG
INVIMFYAPVLFKTLGFADDASLMSAVITGLVNVFATFVSIVTVDRLGRRKLFLQGGTQMLACQIVVGSLIGAKFGFSGVADIPKAYAAFVVLFICAYVA
GFAWSWGPLGWLVPSEIFPLEIRSAGQSINVSVNMLFTFIIAQAFLPMLCRFKFILFFFFGAWVVIMTLFVAFFLPETKNVPIEEMVLVWKSHWYWGRFI
RDEDVHVGADVEMPAAGNRNGKVDPAKLAN

GO Analysis
1
GO Category Biological Process
GO Term transport
2
GO Category Cellular comBiological Processonent
GO Term membrane
3
GO Category Biological Process
GO Term cellular process
4
GO Category Cellular comBiological Processonent
GO Term nucleus
5
GO Category Cellular comBiological Processonent
GO Term cellular_component
6
GO Category Molecular Function
GO Term transporter activity
7
GO Category Cellular comBiological Processonent
GO Term vacuole
8
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No