LOC_Os07g36940

Expression Profile

RGAP LOCUS ID LOC_Os07g36940
RAP-DB ID Os07g0555200
Function eukaryotic translation initiation factor 4G, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 13

2) CELLO Prediction
localization Nuclear
score 4.01

3) NUCPRED Prediction
localization Nuclear
score 0.99

4) Y-Loc Prediction
localization Nuclear
score 99.66
confidence value 0.39
Number Of Software Predicting Nucleus 4
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) eIF4G
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 3
Number of PAT7 0
Number of Bipartite 1
Basic residues % 0.118
NLS score 0.96
Protein Sequence >LOC_Os07g36940.1 protein
MSQRGDRGEGHARRPGRSSSFGGGHRGGGGVGGAGKGGGGSSGQPPLATNRSFRKSGNGHGGHQRAVSQPDTHGFQPAPAPTALQTPPLRPPAPQNAPAH
VPVPAPRPQHHDPSGARAPTLPPSSENTANAPPLKGIPHAAPRAPSRISSTSTSQGAPKGGAYNLQFGSFPMNGGTGGSTMQFPARTSSAPPNLDEQKRM
QALPEGHKVVPSGLVPQAPKHQQQQQPLQQQKQQPQSQPPLQQTRKDVVSSNHSSKPINPHIPSQVKSSVHVSPSVPNVAPPRPPVQQIPGMPMSMPFHH
QAPLQFGGHNPQIPPQGVVPSSLQMSMGLHGANAPQVAQQMYIPTIQHHHQLQPPTMMHQAAGIPYGPAAHQLTQMSGMMNVGVAPQFTPQQPNKYVTGP
TRKTTVKITHPDTHEELKLDKRMDSSGQRGLPSVQQQSQPVSTYGSPMGFYQQNSYNQSTMFYPTTSGVGQVPTVSQGPRFVSTQTVSYISPSMNTGPGS
NKDNLAGSTTSGHSQVTGKPHPAGLHMEKSGVQTVTISAPPGKSDVNKLKPAEDVVSHRQKDNEAVSGVRKSGENESKASPITEKHPTPVSQPLQALAAN
PETTAAASFVVNSVPGDDGKSKESIQRTGSFKDSNKNATKDTRNLSQEPQSASSAEDLKVHTSVKDVCCGVSLMESKGVNKESEQTNAASASPTEMLKAA
DASSIDRSSARSTSESTENVQEVGKSDVAIGDSEKSGITNKVSPDLTKDDISSGSTGNESHEVCTLDLAEQLPVGASNPDNLDTATSVTDQGQLLKEPSS
SVSDENVIMDRSHQSAEKMSDLVDDTVASVASSETLPESIIQNANAKGNTSGNQETGSATSSNILNVLPVPHSVASEDPLKPESMLKDQSSSAPAASARP
VSREKPSVEITRTKFTAVKKKKRREMLSKADAAGSSDLYNAYKGPEEKVDFIGASESLDSSSIADHELPDESSEKEVNMGEDEGKKKVELDDWEDAAEMS
TPKLERSDSSNQTTEANGRKRYSRDFLLTLAQSCTNLPVGFQMIEYASVLFPNLAGKSYVVDHPSPGRGADRPASRGDRRGVVIEDDRWGKSGHLFGSGR
DMSMDNGPPTMNHRGAPGVMRNPRGGLINVGPVAPQMSRSGSDADRWQQKGIFPSPVTPMQVMHKAEKKYVVGKVSDEEEAKQRQLKAILNKLTPQNFEK
LFEKVKEVNIDNVATLTGVISQIFDKALMEPTFCEMYANFCFHLAGALPDFSEDNEKITFKRLLLNKCQEEFERGEREEAEADKTEEEGEIKQTKEEREE
KRIRARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGNYQNPDEENIEALCKLMSTIGEMIDHAKAKEHMDAYFDIMLKLSTSQQLSSRVRFMLRDSI
DLRKNKWQQRRKVEGPKKIDEVHRDAAQERHAQSSRLARGSVVGSGPRRGAAPMDYGPRGSAAALASPSSQQVGHRGMPSHSRGFGTQDIRFEERSPLDH
RTTVLPPRKDEAITLGPQGGLARGMSIRGQPLISNAELSSADSRRMVSGPNGYNSASTAREEPGSRIPDRSGRIAPNTQFAGPSNRPASQEGRSGNKLYS
EDDLREKSISAIREYYSAKDEKEVALCIEELNAPSFYPSVVSLWVNDSFERKDMERELLTKLFVSLCNSRNNLLSKSHLTAGLATVLGSLEDALSDAPRA
AEYLGRLLARFVVESILSLQEVGTLIEKGGEEPGELVHHGIGADVLGAVLESIKVEKGDSFLNEAKASSNLKLEDFRPQHLKRSKLDAFMKA

GO Analysis
1
GO Category Biological Process
GO Term translation
2
GO Category Molecular Function
GO Term translation factor activity, nucleic acid binding
3
GO Category Biological Process
GO Term response to biotic stimulus
4
GO Category Biological Process
GO Term response to endogenous stimulus
Presence of Splice variants YES