LOC_Os07g32480

Expression Profile

RGAP LOCUS ID LOC_Os07g32480
RAP-DB ID Os07g0508500
Function mitotic checkpoint serine/threonine-protein kinase BUB1, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 8

2) CELLO Prediction
localization Cytoplasmic
score 1.471

3) NUCPRED Prediction
localization Non Nuclear
score 0.11

4) Y-Loc Prediction
localization Chloroplast
score 8
confidence value 0.19
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) BRK1
Function assigned as per literature BRK1 is essential for generating proper tension between homologous kinetochores at metaphase I of rice meiosis
Subcellular localization as per literature Kinetochores
Cells used for localization experiment Wild-type pollen mother cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 23243128
Reference of localization http://www.plantcell.org/content/24/12/4961.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.105
NLS score -0.47
Protein Sequence >LOC_Os07g32480.1 protein
MNNLLENINVDLKKFAGYHKSNKVYHGKVPLTSPQNVLRNKVIELGGRKYQIKGSPGTGAFAKVYKASVDGNTEDLVALKIQKPPFPWEFYMYRQLDTRV
SDIERPSFGYTHEVHVYADVSVLVCDYLPYGTLLDVINSHLVLERHMDEVLCIYYTIEMLRMLETLHSVGIIHGDFKPDNMLVCYPSGEITDETFKGETR
SERNQGLCLVDWGRGIDLNLFPSGAEFYGDCRTSGFSCVEMQEQRAWTFQADTYGLCVIAHMMLHGTQMSIQKTPRPDGSYMYQPTSPFKRYWNVELWKN
LFSTLLNATSNGSDAAVLRSLRMSFQEYLCSNRQLVGKLNQQLAKQKTSLCLS

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Molecular Function
GO Term kinase activity
3
GO Category Molecular Function
GO Term nucleotide binding
4
GO Category Biological Process
GO Term protein modification process
Presence of Splice variants No