LOC_Os07g31720

Expression Profile

RGAP LOCUS ID LOC_Os07g31720
RAP-DB ID Os07g0500300
Function GTPase activating protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 9.5

2) CELLO Prediction
localization Cytoplasmic
score 2.06

3) NUCPRED Prediction
localization Non Nuclear
score 0

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.72
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsGAP
Function assigned as per literature OsGAP acts as negative regulators in ABA signaling in seed germination.
Subcellular localization as per literature Nucleus and cytoplasm
Cells used for localization experiment Rice protoplasts
NUCLEAR or Not Nuclear NUCLEAR
PMID 31436865
Reference of localization https://onlinelibrary.wiley.com/doi/pdf/10.1111/tpj.14501
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.11
NLS score -0.47
Protein Sequence >LOC_Os07g31720.1 protein
MAAAAAHKEEVIGKLNVRVVRGSNLIIADPLTHTSDPYVVLSYGPQKVKTSVQKKNSNPVWNEVLQLAVTNPTKPVKLEVFDEDKFTADDSMGVAEFNVT
DIYDAAKLDLKHVSDGARIKTIYPVGVNYLGAESHVSWKNGKVVQDITLKLSKVDSGLIVLQLEWVHVPGVTL

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term cellular_component
3
GO Category Biological Process
GO Term response to abiotic stimulus
4
GO Category Biological Process
GO Term tropism
Presence of Splice variants No