LOC_Os07g30970

Expression Profile

RGAP LOCUS ID LOC_Os07g30970
RAP-DB ID Os07g0492000
Function nucleoside diphosphate kinase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 10

2) CELLO Prediction
localization Cytoplasmic
score 2.272

3) NUCPRED Prediction
localization Non Nuclear
score 0.01

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.25
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsNDPK1
Function assigned as per literature OsNDPK1 is a ubiquitous enzyme that catalyzes the transfer of the γ-phosphoryl group from a nucleoside triphosphate to a nucleoside diphosphate
Subcellular localization as per literature cytosol
Cells used for localization experiment onion epidermal cells and rice protoplast
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 21897044
Reference of localization https://www.tandfonline.com/doi/pdf/10.1271/bbb.110285?needAccess=true
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.121
NLS score -0.47
Protein Sequence >LOC_Os07g30970.1 protein
MEQSFIMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFPGLVEYIISGPVVAMVWEGKDVVATGRRIIGATRPWEAAPGT
IRADYAVEVGRNVIHGSDSVDNGKKEIALWFPEGLAEWRSNLHPWIYES

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term extracellular region
2
GO Category Molecular Function
GO Term nucleotide binding
3
GO Category Cellular comBiological Processonent
GO Term cellular_component
4
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
5
GO Category Biological Process
GO Term biosynthetic process
6
GO Category Cellular comBiological Processonent
GO Term peroxisome
7
GO Category Molecular Function
GO Term kinase activity
8
GO Category Cellular comBiological Processonent
GO Term vacuole
9
GO Category Cellular comBiological Processonent
GO Term membrane
10
GO Category Biological Process
GO Term biological_process
11
GO Category Cellular comBiological Processonent
GO Term cytosol
12
GO Category Biological Process
GO Term response to stress
13
GO Category Biological Process
GO Term response to abiotic stimulus
14
GO Category Cellular comBiological Processonent
GO Term plasma membrane
15
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants YES