LOC_Os07g29620

Expression Profile

RGAP LOCUS ID LOC_Os07g29620
RAP-DB ID Os07g0479300
Function OsSCP39 - Putative Serine Carboxypeptidase homologue, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization vacu
score 5

2) CELLO Prediction
localization Vacuole
score 1.901

3) NUCPRED Prediction
localization Non Nuclear
score 0.12

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.03
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) R-CPD3L|cbp31
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.078
NLS score -0.47
Protein Sequence >LOC_Os07g29620.1 protein
MGPTRQSHSLLLTFLLVGAAAAAAAASPEDGSPFLRLPTASDLPVPAGQLPRSAAVGLIRALNLHPRDASPSPSSRGDGDVPAGTLVERPIHLASMATGK
SGGSSAEDLGHHAGYYRLPNTHDARLFYFFFESRGSKGEDDPVVIWLTGGPGCSSELALFYENGPFHIADNMSLVWNDFGWDQESNLIYVDQPTGTGFSY
SSNPRDTRHDEAGVSNDLYAFLQAFFTEHPNFAKNDFYITGESYAGHYIPAFASRVYKGNKNSEGIHINLKGFAIGNGLTDPAIQYKAYTDYSLDMGLIT
KSQFNRINKIVPTCELAIKLCGTSGTISCLGAYVVCNLIFSSIETIIGKKNYYDIRKPCVGSLCYDLSNMEKFLQLKSVRESLGVGDIQFVSCSPTVYQA
MLLDWMRNLEVGIPELLENDIKVLIYAGEYDLICNWLGNSRWVNSMEWSGKEAFVSSSEEPFTVDGKEAGILKSYGPLSFLKVHDAGHMVPMDQPKVALE
MLMRWTSGNLSNASSSFQRLDFTM

GO Analysis
1
GO Category Biological Process
GO Term protein metabolic process
2
GO Category Molecular Function
GO Term hydrolase activity
3
GO Category Cellular comBiological Processonent
GO Term cytosol
4
GO Category Cellular comBiological Processonent
GO Term vacuole
Presence of Splice variants No