LOC_Os07g29390

Expression Profile

RGAP LOCUS ID LOC_Os07g29390
RAP-DB ID Os07g0476500
Function peptidyl-prolyl cis-trans isomerase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization mito
score 8

2) CELLO Prediction
localization Mitochondrial
score 2.062

3) NUCPRED Prediction
localization Non Nuclear
score 0.1

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.77
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCYP21-4
Function assigned as per literature OsCYP21-4 plays a role in oxidative stress tolerance in rice
Subcellular localization as per literature Golgi apparatus
Cells used for localization experiment Nicotiana benthamiana leaves
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 26483814
Reference of localization https://www.frontiersin.org/articles/10.3389/fpls.2015.00797/full
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.119
NLS score -0.47
Protein Sequence >LOC_Os07g29390.3 protein
MARIKPKQLLIQSKTKKAPTRISYSTIVTWNLIVILVALSLYATYRHWHHRPMLETEMDLPRAEHVGRSEDSTKTSRPSYAVIDTAKGSITIEIYKDASA
DVVDRFVSLCKSNHFKGMPFRHVIKNFVIQGGDFDFNGAAQEWILKAKASGENALSPKHEAFMIGTTKNPNNKGFDLFITTAPIPDLNDKLVVFGQVING
QDIVQEIEEVDTDEHYQPKTPIGILNITLKQQALS

GO Analysis
1
GO Category Biological Process
GO Term protein metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term catalytic activity
4
GO Category Cellular comBiological Processonent
GO Term Golgi apparatus
5
GO Category Biological Process
GO Term protein modification process
6
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants YES