LOC_Os07g28820

Expression Profile

RGAP LOCUS ID LOC_Os07g28820
RAP-DB ID Os07g0471000
Function ribonuclease 2-5A family protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 7

2) CELLO Prediction
localization Nuclear
score 1.262

3) NUCPRED Prediction
localization Non Nuclear
score 0.74

4) Y-Loc Prediction
localization Cytoplasm
score 83
confidence value 0.21
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) IRE1|OsIRE1
Function assigned as per literature OsIre1 encodes a putative plant transducer of Endoplasmic reticulum stress
Subcellular localization as per literature Endoplasmic reticulum
Cells used for localization experiment Tobacco BY2 cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 12040100
Reference of localization https://academic.oup.com/pcp/article/43/5/532/1874815
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.111
NLS score -0.16
Protein Sequence >LOC_Os07g28820.1 protein
MRSLRRVLLQLVLLAGVAFRGVRFDDAADAAAAAQGSSDLFELPSPSPTLALPGGGDEGASTEIIAAPWPGRHGLFTPPRSTSQPARAVVQPAADFGSQL
QFYDNGTIQLVDLLSKLPRWQFSTGPPLSKHITTSKPDLNYVIYLDGSETSDLIEVHNGSGVRLPWKLEEFIAETPYIRDSFVTIGSKVSTTFVVNADSG
EIIYKHSLPVALNEVGGPLVEEIPSKLDAARSGTSANIIVVVRTDYSISASDLGEHLFNWTRTSFTANYYARYGHQDMLAQSSCLRGNIPCIRTEGPPIK
LYLPDSSSDNAIVLRPVNEVSAVDALEPLLPPKKLPQPAGESNVALDSAQNQTADIALGHFVPADTELTNSVTKFSYRWLFPTFLMLLIMACLVKLADAS
KYCRQFVIRFLKPFMRDEKLMDPRGKSEGTSKRRKARKKDGLINSTQIFSASDKEGNGTGGSTEAQSNKAHDSTNVELPNGLNGRQIGKLCVYSKEIGKG
SNGTVVFEGSYGGREVAVKRLLRSHNDIASKEIENLIASDQDPNIVRMYGFEQDNDFVYISLERCRCSLADLIQLHSVPPFSNTKGTDIELWRQDGLPSA
QLLKLMRDVVAGIVHLHSLGIIHRDLKPQNVLISKEGPLRAKLSDMGISKRLQEDMTSVSHHGTGFGSSGWQAPEQLRHGRQTRAIDLFSLGCLIFYCIT
KGKHPFGEYYERDMKIINNQFDLFIVDHIPEAVHLISQLLDPDPEKRPTAVYVMHHPFFWSPELCLSFLRDTSDRIEKTSETDLIDALEGINVEAFGKNW
GEKLDAALLADMGRYRKYSFESTRDLLRLIRNKSGHYREFSDDLKELLGSLPEGFVQYFSSRFPKLLIKVYEVMSEHCKDEEAFSKYFLGSSA

GO Analysis
1
GO Category Molecular Function
GO Term nuclease activity
2
GO Category Cellular comBiological Processonent
GO Term membrane
3
GO Category Cellular comBiological Processonent
GO Term endoplasmic reticulum
4
GO Category Biological Process
GO Term metabolic process
5
GO Category Biological Process
GO Term cellular process
6
GO Category Molecular Function
GO Term kinase activity
7
GO Category Biological Process
GO Term signal transduction
8
GO Category Biological Process
GO Term response to stress
9
GO Category Biological Process
GO Term protein modification process
Presence of Splice variants No