LOC_Os07g26940

Expression Profile

RGAP LOCUS ID LOC_Os07g26940
RAP-DB ID Os07g0452500
Function ORM1, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 5

2) CELLO Prediction
localization PlasmaMembrane
score 3.971

3) NUCPRED Prediction
localization Non Nuclear
score 0.01

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.87
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) ORMDL
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.079
NLS score -0.47
Protein Sequence >LOC_Os07g26940.1 protein
MGRRAGSYPYYVEAAPPVDVNKNTEWFMYPGVWTTYILLLFFAWLLVLSVSACSPGIAWTVVNLAHFAITYHFFHWKKGTPFAADDQGIYNRLTWWEQID
NGQQLTRNRKFLTVVPVVLYLIASHLTDYKQPMLFLNTIAVLVLVVAKLPNMHKVRIFGINADI

GO Analysis
1
GO Category Biological Process
GO Term protein metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term molecular_function
4
GO Category Cellular comBiological Processonent
GO Term endoplasmic reticulum
Presence of Splice variants YES