LOC_Os07g22930

Expression Profile

RGAP LOCUS ID LOC_Os07g22930
RAP-DB ID Os07g0412100
Function starch synthase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 13

2) CELLO Prediction
localization Chloroplast
score 2.292

3) NUCPRED Prediction
localization Non Nuclear
score 0.06

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.88
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsGBSSII
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.1
NLS score -0.22
Protein Sequence >LOC_Os07g22930.3 protein
MARTMGSTPTYCSYQTNGVGALKQSPHMQFQQSYNYGVRFLKRDTLSVRINKHMAKRIATSTGICTKPRRSHMPIVCSAGMTIIFIATECHPWCKTGGLG
DVLGGLPPALAAMGHRVMTIVPRYDQYKDAWDTNVLVEVNIGDRTETVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGPKLYGPTTGDDYRDNQLRFCLLC
LAALEAPRVLNLNNSEYFSGPYGENVVFVANDWHTGVLPCYLKSIYQAKGMYVNAKVAFCIHNIAYQGRFAREDFELLNLPDSFLPSFDFIDGHFKPVVG
RKINWMKAGITECDLVMTVSPHYVKELASGPDKGVELDGILRTKPLETGIVNGMDVYEWNPATDQYISVKYDATTVTEARALNKEMLQAEVGLPVDSSIP
LIVFVGRLEEQKGSDILIAAIPEFVEGNVQIIVLGTGKKKMEEELILLEVKYPNNARGIAKFNVPLAHMMFAGADFIIVPSRFEPCGLIQLQGMRYGVVP
ICSSTGGLVDTVKEGVTGFHMGLFNVECETVDPVDVTAVASTVKRALKQYNTPAFQEMVQNCMAQDLSWKGPAKKWEEVLLGLGVEGSQPGIEGEELAPL
AKENVATP

GO Analysis
1
GO Category Molecular Function
GO Term transferase activity
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Biological Process
GO Term biosynthetic process
4
GO Category Molecular Function
GO Term protein binding
5
GO Category Biological Process
GO Term carbohydrate metabolic process
6
GO Category Biological Process
GO Term cellular process
7
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants YES