LOC_Os07g15370

Expression Profile

RGAP LOCUS ID LOC_Os07g15370
RAP-DB ID Os07g0257200
Function metal transporter Nramp6, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 7

2) CELLO Prediction
localization PlasmaMembrane
score 4.869

3) NUCPRED Prediction
localization Non Nuclear
score 0.02

4) Y-Loc Prediction
localization Cytoplasm
score 90
confidence value 0.32
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsNRAMP5
Function assigned as per literature OsNRAMP5 contributes to Mn, Cd, and Fe transport in rice
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment onion epidermal cells and rice protoplast
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 22368778
Reference of localization https://www.nature.com/articles/srep00286
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.084
NLS score -0.47
Protein Sequence >LOC_Os07g15370.1 protein
MEIERESSERGSISWRASAAHDQDAKKLDADDQLLMKEPAWKRFLAHVGPGFMVSLAYLDPGNLETDLQAGANHRYELLWVILIGLIFALIIQSLAANLG
VVTGRHLAEICKSEYPKFVKIFLWLLAELAVIAADIPEVIGTAFAFNILFHIPVWVGVLITGTSTLLLLGLQKYGVRKLEFLISMLVFVMAACFFGELSI
VKPPAKEVMKGLFIPRLNGDGATADAIALLGALVMPHNLFLHSALVLSRKTPASVRGIKDGCRFFLYESGFALFVALLINIAVVSVSGTACSSANLSQED
ADKCANLSLDTSSFLLKNVLGKSSAIVYGVALLASGQSSTITGTYAGQYIMQGFLDIRMRKWLRNLMTRTIAIAPSLIVSIIGGSRGAGRLIIIASMILS
FELPFALIPLLKFSSSKSKMGPHKNSIYIIVFSWFLGLLIIGINMYFLSTSFVGWLIHNDLPKYANVLVGAAVFPFMLVYIVAVVYLTIRKDSVVTFVAD
SSLAAVVDAEKADAGDLAVDDDEPLPYRDDLADIPLPR

GO Analysis
1
GO Category Biological Process
GO Term transport
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term transporter activity
4
GO Category Cellular comBiological Processonent
GO Term plasma membrane
5
GO Category Biological Process
GO Term biological_process
6
GO Category Biological Process
GO Term cellular homeostasis
Presence of Splice variants YES