LOC_Os07g13980

Expression Profile

RGAP LOCUS ID LOC_Os07g13980
RAP-DB ID Os07g0243200
Function glucose-1-phosphate adenylyltransferase large subunit, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization mito
score 8

2) CELLO Prediction
localization Chloroplast
score 3.195

3) NUCPRED Prediction
localization Non Nuclear
score 0.05

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.97
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsAPL4|OsAGPL4
Function assigned as per literature OsAGPL4 encodes large subunit of the enzyme ADP-glucose pyrophosphorylase (AGP) and may play an essential for starch synthesis in the leaf and seed endosperm of rice
Subcellular localization as per literature Plastid
Cells used for localization experiment Maize protoplast
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 17406793
Reference of localization https://link.springer.com/article/10.1007%2Fs11103-007-9153-z
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.116
NLS score -0.47
Protein Sequence >LOC_Os07g13980.1 protein
MATCSWAATTAAAAPPRPPARCRSRVAALRRTAAASAAAASCVLAEAPKGLKVEQADAVEPAAAAAARRDVGPDTVASIILGGGAGTRLFPLTRTRAKPA
VPVGGCYRLIDIPMSNCINSKINKIYVLTQFNSQSLNRHIARTYNIGEGVGFGDGFVEVLAATQTTGESGKRWFQGTADAVRQFLWLFEDARLKRIENIL
ILSGDHLYRMDYMDFVQKHVDKGADISVACVPVDESRASDFGLMKTDKNGRITDFLEKPKDESLKSMQLDMGTFGLRPEVADTCKYMASMGIYVFRTDIL
LRLLRGHYPTANDFGSEVIPMAAKDYNVQAYLFDGYWEDIGTIKSFFEANLALTDQSPNFYFYDPVKPIFTSPRFLPPTKVENCKVLNSIVSHGCFLTEC
SVDRSVIGVRSRLEPGVQLKDTMMMGADYYQTEAERFSELSDGKVPVGVGENTIIRNCIIDKNARIGKNVMIMNSQNVQEAERPLEGFYIRSGITVVLKN
AVIPDGTVI

GO Analysis
1
GO Category Biological Process
GO Term biosynthetic process
2
GO Category Biological Process
GO Term carbohydrate metabolic process
3
GO Category Biological Process
GO Term cellular process
4
GO Category Cellular comBiological Processonent
GO Term cellular_component
5
GO Category Biological Process
GO Term metabolic process
6
GO Category Molecular Function
GO Term transferase activity
Presence of Splice variants No