LOC_Os07g08960

Expression Profile

RGAP LOCUS ID LOC_Os07g08960
RAP-DB ID Os07g0187300
Function RNA recognition motif containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 6

2) CELLO Prediction
localization Nuclear
score 3.119

3) NUCPRED Prediction
localization Non Nuclear
score 0.23

4) Y-Loc Prediction
localization Chloroplast
score 8
confidence value 0.2
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsRZ2
Function assigned as per literature OsRZ2 possesses an RNA chaperone activity
Subcellular localization as per literature Nucleus
Cells used for localization experiment Root cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 20088860
Reference of localization https://onlinelibrary.wiley.com/doi/abs/10.1111/j.1365-3040.2009.02101.x
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.162
NLS score -0.47
Protein Sequence >LOC_Os07g08960.1 protein
MAEKEVGRIFVGGLSWDTTERTLERAFSEYGKVIETQVVLERDTGRSRGFGFVTFSEPRAVDAAIRGMHNGELDGRTISVNKAQPRMNTDDGYGYGGGGG
GGGTYSSGARGGYRGGGDAVPSANDDCFKCGRAGHWARECPYSSGGGGGRTGRYSPPSRYGSGTGGGRGDRFGGSDRFANRYVDDRYDGGRYVDDRYGGG
GRDRYATDRYPPTADRFTGDRYGGSDRYASSGFTRERSYERDGGRSGGSYYRDEPRGSGGYDRGGMRMGSGDRYGTGGPARFAGSYRDRPAPYDRPSRAA
ARTYDDRY

GO Analysis
1
GO Category Molecular Function
GO Term RNA binding
2
GO Category Cellular comBiological Processonent
GO Term nucleus
3
GO Category Biological Process
GO Term response to stress
4
GO Category Biological Process
GO Term response to abiotic stimulus
5
GO Category Cellular comBiological Processonent
GO Term nucleolus
6
GO Category Molecular Function
GO Term nucleic acid binding
Presence of Splice variants No