LOC_Os07g08430

Expression Profile

RGAP LOCUS ID LOC_Os07g08430
RAP-DB ID Os07g0182100
Function indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 13

2) CELLO Prediction
localization Chloroplast
score 3.55

3) NUCPRED Prediction
localization Non Nuclear
score 0

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.94
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsTSA|pOsTSA
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.1
NLS score -0.47
Protein Sequence >LOC_Os07g08430.1 protein
MAFALKASTASAAAASTASASASSLSVAAAAPGRRGGAAGRVSFRGVPAPMVAIRAEAAAVGEDERVISGTFAKLKEQGKTAFIPFITAGDPDLATTAKA
LKILDACGSDLIELGVPYSDPLADGPVIQASATRALSKGTTFEDVISMVKEVIPELSCPVALFTYYNPILKRGIANFMTVVKEAGVHGLVVPDVPLEETN
ILRSEAAKNNLELVLLTTPTTPTERMEKITKASEGFIYLVSTVGVTGARANVSGKVQSLLQDIKQVTDKAVAVGFGISTPEHVKQIAGWGADGVIIGSAM
VRQLGEAASPEEGLKKLEELAKSLKAALP

GO Analysis
1
GO Category Biological Process
GO Term biosynthetic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term catalytic activity
4
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No