LOC_Os07g08340

Expression Profile

RGAP LOCUS ID LOC_Os07g08340
RAP-DB ID Os07g0181000
Function pyruvate kinase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 10.5

2) CELLO Prediction
localization Chloroplast
score 4.046

3) NUCPRED Prediction
localization Non Nuclear
score 0.33

4) Y-Loc Prediction
localization Chloroplast
score 8
confidence value 0.94
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPK2|W59|OsPKpalpha1
Function assigned as per literature OsPK2 has role in plant seed development, especially in starch synthesis, compound granules formation and grain filling
Subcellular localization as per literature Chloroplast
Cells used for localization experiment rice protoplasts and tobacco leaves
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 29577566
Reference of localization https://onlinelibrary.wiley.com/doi/full/10.1111/pbi.12923
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.116
NLS score -0.47
Protein Sequence >LOC_Os07g08340.1 protein
MAATAAAAHTLLHLAAPRKPSAGPPLPPATLRLPSRRLARLTASCSSGSGNNSAADFPNPNGILVAPPSAAAVAAASSHIDVDVATEADLRENGFRSTRR
TKLVCTVGPATCGADELEALAVGGMNVARVNMCHGDREWHRGVIRAVRRLNEEKGFAVAVMMDTEGSEIHMGDLGGAAAAKAEDGEIWTFSVRSFEAPPP
ERTIHVNYEGFAEDVRVGDELLVDGGMARFEVVEKLGPDVKCRCTDPGLLLPRANLTFWRDGSIVRERNAMLPTISSKDWLDIDFGISEGVDFIAVSFVK
SAEVINHLKSYIAARSRGSDIAVIAKIESIDSLKNLEEIIRASDGAMVARGDMGAQIPLEQVPSVQQKIVKLCRQLNKPVIVASQLLESMIEYPTPTRAE
VADVSEAVRQRADALMLSGESAMGRYPEKALSVLRSVSLRIEKWWREEKRHEELELKDVSSSFSDKISEEICISAAKMANKLEVDAVFVYTNTGHMASLL
SRCRPDCPIFAFTTSTSVRRRLNLQWGLIPFRLSFSDDMESNLNRTFSLLKARGMIQSGDLVIALSDMLQSIQVMNVP

GO Analysis
1
GO Category Biological Process
GO Term biological_process
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Biological Process
GO Term cellular process
4
GO Category Molecular Function
GO Term kinase activity
5
GO Category Biological Process
GO Term carbohydrate metabolic process
6
GO Category Biological Process
GO Term generation of precursor metabolites and energy
7
GO Category Biological Process
GO Term catabolic process
8
GO Category Biological Process
GO Term lipid metabolic process
9
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants YES