LOC_Os07g06740

Expression Profile

RGAP LOCUS ID LOC_Os07g06740
RAP-DB ID Os07g0161600
Function CAMK_CAMK_like.31 - CAMK includes calcium/calmodulin depedent protein kinases, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization vacu
score 6

2) CELLO Prediction
localization Cytoplasmic
score 2.171

3) NUCPRED Prediction
localization Non Nuclear
score 0.19

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.49
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCPK17
Function assigned as per literature
Subcellular localization as per literature Alternative splice variants OsCPK17.1, OsCPK17.2, OsCPK17.4 and OsCPK17.5 localized to the golgi apparatus but OsCPK17.3 localized in both nucleus and cytoplasm
Cells used for localization experiment Onion peel
NUCLEAR or Not Nuclear NUCLEAR
PMID 29100789
Reference of localization https://www.sciencedirect.com/science/article/pii/S0167488917302859
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 2
Number of Bipartite 0
Basic residues % 0.12
NLS score 0.64
Protein Sequence >LOC_Os07g06740.2 protein
MGNTCVGPSSAADRHGFFHSVSLAVLWRPGGRAEPSQPPGYPPRESSHSSVTSSTAPERVTIADSDLSSSTPNKGGNKPKVRRVQSAGLLADSVLKRDSE
RLKDLYTLGKKLGQGQFGTTYQCVEKATGKVLACKSIAKRKLVSEEDVEDVRREIQIMHHLAGHPSVVSIVGAYEDAVAVHLVMELCAGGELFDRIVQRG
HYSEKAAAQLARVIIGVVEACHSLGVMHRDLKPENFLFVNHKEDSPLKTIDFGLSIFFKPGENYSDVVGSPYYVAPEVLMKHYGREVDVWSAGVIIYILL
SGVPPFWDESEQGIFEKVLKGDLDFSSDPWPAISDSAKDLVRKMLNRDPRKRLTAHEALCHPWVCVDGVAPDKPLDSAVLTRLKQFSAMNKLKKMALRVI
AENLSEDEIAGLREMFKMLDTDNSGQITLEELKTGLRRVGANLKDSEITTLMEAADIDNSGSIDYGEFIAATMHLNKVEREDNLFAAFSYFDKDSSGYIT
QDELQKACEEFGIGDAHLEDIIKDIDQDNDGRIDYNEFVTMMQKGNNPLGKKGQGQLSFGLREALKLG

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Molecular Function
GO Term kinase activity
3
GO Category Molecular Function
GO Term protein binding
4
GO Category Biological Process
GO Term biosynthetic process
5
GO Category Biological Process
GO Term protein modification process
6
GO Category Cellular comBiological Processonent
GO Term peroxisome
Presence of Splice variants YES