LOC_Os07g04560

Expression Profile

RGAP LOCUS ID LOC_Os07g04560
RAP-DB ID Os07g0138200
Function no apical meristem protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 6

2) CELLO Prediction
localization Nuclear
score 3.475

3) NUCPRED Prediction
localization Non Nuclear
score 0.41

4) Y-Loc Prediction
localization Nuclear
score 96.29
confidence value 0.93
Number Of Software Predicting Nucleus 3
Seed Specific Yes
Transcription factor category NAC

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) ONAC096
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.102
NLS score -0.47
Protein Sequence >LOC_Os07g04560.1 protein
MKRGCEDELGAGDVILRGVEEVEEEDDDDLVLPGFRFHPTDEELVTFYLRRKIAEKRLSIEIIKEMDIYKHDPSDFLKTSTVGSEKEWYFFCLRGRKYRN
SIRPNRVTGSGFWKATGIDRPICSAAGGGGGDCIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPPPADDLAAGRSSPPPSLQEAEVWTICRIFQRNITHK
KQPQPQLAVAAAAVPAPVPDATSSITGSLESDSAGDDVVEYMNTLQPPPASNVNGGYSNQRYFQEQWNSSSNDNTTVFHQHAAAAPPPEPSPATAMAGFG
HDQSVLSSPAPSDFYYKDGCNDDIYRMVMELADPSLFYDHIYA

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Biological Process
GO Term biosynthetic process
3
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
4
GO Category Biological Process
GO Term multicellular organismal development
5
GO Category Molecular Function
GO Term sequence-specific DNA binding transcription factor activity
Presence of Splice variants No