LOC_Os07g03770

Expression Profile

RGAP LOCUS ID

LOC_Os07g03770

RAP-DB ID

Os07g0129700

Function

Homeobox domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction

localization

Nuclear

score

2) CELLO Prediction

localization

Nuclear

score

3.218

3) NUCPRED Prediction

localization

Non Nuclear

score

0.69

4) Y-Loc Prediction

localization

Nuclear

score

99.99

confidence value

0.93

Number Of Software Predicting Nucleus

Seed Specific

Transcription factor category

HB/TALE

Experimental evidence for subcellular localization

Published gene name (updated 1 January 2020)

D6|OSH15|Oskn3

Function assigned as per literature

OSH15 may be involved in morphogenetic events around the shoot apical meristem, Functions in Lignin Biosynthesis and Internode Development

Subcellular localization as per literature

Nucleus

Cells used for localization experiment

Onion epidermal cells

NUCLEAR or Not Nuclear

NUCLEAR

PMID

11549765

Reference of localization

http://www.plantcell.org/content/13/9/2085.long

Is Subcellular localization evidence by author available ?

Sequence Analysis

Number of PAT4

Number of PAT7

Number of Bipartite

Basic residues %

0.115

NLS score

0.34

Protein Sequence

>LOC_Os07g03770.1 protein
MDQSFGNLGGGGGAGGSGKAAASSFLQLPLSTAAAATAYYGTPLALHQAAAAAGPSQYHGHGHPHHGGGHHHSKHGGAGGGEISAAEAESIKAKIMAHPQ
YSALLAAYLDCQKVGAPPEVLERLTATAAKLDARPPGRHDARDPELDQFMEAYCNMLAKYREELTRPIDEAMEFLKRVESQLDTIAGGAHGGGAGSARLL
LADGKSECVGSSEDDMDPSGRENEPPEIDPRAEDKELKFQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGL
DQKQINNWFINQRKRHWKPSEDMPFVMMEGFHPQNAAALYMDGPFMADGMYRLGS

GO Analysis

GO Category	Biological Process
GO Term	multicellular organismal development

GO Category	Biological Process
GO Term	cell differentiation

GO Category	Cellular comBiological Processonent
GO Term	nucleus

GO Category	Molecular Function
GO Term	protein binding

GO Category	Biological Process
GO Term	biosynthetic process

GO Category	Biological Process
GO Term	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

GO Category	Molecular Function
GO Term	sequence-specific DNA binding transcription factor activity

Presence of Splice variants