LOC_Os07g03710

Expression Profile

RGAP LOCUS ID LOC_Os07g03710
RAP-DB ID Os07g0129200
Function SCP-like extracellular protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 5

2) CELLO Prediction
localization Extracellular
score 4.52

3) NUCPRED Prediction
localization Non Nuclear
score 0.02

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.93
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPR1a|OsSCP
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.048
NLS score -0.47
Protein Sequence >LOC_Os07g03710.1 protein
MASSSSRLSCCLLVLAAAAMAATAQNSAQDFVDPHNAARADVGVGPVSWDDTVAAYAESYAAQRQGDCKLEHSDSGGKYGENIFWGSAGGDWTAASAVSA
WVSEKQWYDHGSNSCSAPEGSSCGHYTQVVWRDSTAIGCARVVCDGDLGVFITCNYSPPGNFVGQSPY

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Molecular Function
GO Term molecular_function
3
GO Category Cellular comBiological Processonent
GO Term extracellular region
4
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No