LOC_Os07g01560

Expression Profile

RGAP LOCUS ID LOC_Os07g01560
RAP-DB ID Os07g0106200
Function transporter family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 9

2) CELLO Prediction
localization PlasmaMembrane
score 4.931

3) NUCPRED Prediction
localization Non Nuclear
score 0.12

4) Y-Loc Prediction
localization Cytoplasm
score 47
confidence value 0.22
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsMST3
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.083
NLS score -0.22
Protein Sequence >LOC_Os07g01560.1 protein
MAGGAVVSTGAGKDYPGKLTLFVFFTCVVAATGGLIFGYDIGISGGVTSMDPFLRKFFPEVYRKKQMADKNNQYCKYDNQLLQTFTSSLYLAALVSSFFA
ATVTRVLGRKWSMFAGGLTFLIGAALNGAAENVAMLIVGRILLGVGVGFANQSVPVYLSEMAPARLRGMLNIGFQLMITIGILAAELINYGTAKIKAGWG
WRVSLALAAVPAAIITLGSLFLPDTPNSLIDRGHPEAAERMLRRIRGSDVDVSEEYADLVAASEESKLVQHPWRNILRRKYRAQLTMAICIPFFQQLTGI
NVIMFYAPVLFDTLGFKSDASLMSAVITGLVNVFATLVSIFTVDRLGRRKLFLQGGAQMVVCQVVVGTLIAVKFGTSGIGDIPKGYAAVVVLFICMYVAG
FAWSWGPLGWLVPSEIFPLEIRPAGQSINVSVNMLFTFVIAQAFLTMLCHMKFGLFYFFAGWVVIMTVFIALFLPETKNVPIEEMVLVWKSHWFWRRFIG
DHDVHVGANHVSNNKLQP

GO Analysis
1
GO Category Biological Process
GO Term transport
2
GO Category Cellular comBiological Processonent
GO Term membrane
3
GO Category Biological Process
GO Term cellular process
4
GO Category Cellular comBiological Processonent
GO Term nucleus
5
GO Category Cellular comBiological Processonent
GO Term cellular_component
6
GO Category Molecular Function
GO Term transporter activity
7
GO Category Cellular comBiological Processonent
GO Term vacuole
8
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants YES