LOC_Os07g01490

Expression Profile

RGAP LOCUS ID LOC_Os07g01490
RAP-DB ID Os07g0105700
Function kinesin motor domain containing protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 10

2) CELLO Prediction
localization Nuclear
score 2.977

3) NUCPRED Prediction
localization Non Nuclear
score 0.63

4) Y-Loc Prediction
localization Nuclear
score 50.39
confidence value 0.32
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsDLK
Function assigned as per literature
Subcellular localization as per literature enters the nucleus in response to cold, else it stays in the cortical microtubules in the interphase cell
Cells used for localization experiment Tobacco BY2 cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 29483672
Reference of localization https://www.nature.com/articles/s41598-018-21816-w
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.114
NLS score -0.47
Protein Sequence >LOC_Os07g01490.1 protein
METMTEYEKQKRMLEDLQLRLEEAEQQILDGENLRKRLHNTILELKGNIRVFCRVRPLLPNESGAVAYPKSGENLGRGIELTHNAQMYSFTFDKVFEQSA
SQEDVFIEISQLIQSALDGYKVCIFAYGQTGSGKTYTMMGNPELHDQKGLIPRSLEQIFQTSQALISQGWKYKMQASMLEIYNEAIRDLLATNRTTVQDG
GASKYSIKHDANGNTHVSDLTIVDVSSINEVSSLLKRAAQSRSVGRTQMNEESSRSHCVFTLRIFGVNEGTDQQVQGVLNLIDLAGSERLNKSGATGDRL
KETQAINKSLSCLSDVIFSIAKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNLSPEVSSTGESICSLRFAARVNSCEIGIPRRQTQVRSLAQG

GO Analysis
1
GO Category Biological Process
GO Term cellular component organization
2
GO Category Biological Process
GO Term cellular process
3
GO Category Cellular comBiological Processonent
GO Term nucleus
4
GO Category Biological Process
GO Term metabolic process
5
GO Category Biological Process
GO Term cell cycle
6
GO Category Molecular Function
GO Term motor activity
7
GO Category Cellular comBiological Processonent
GO Term cytoskeleton
Presence of Splice variants YES