LOC_Os07g01240

Expression Profile

RGAP LOCUS ID LOC_Os07g01240
RAP-DB ID Os07g0102300
Function expressed protein

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 6

2) CELLO Prediction
localization Extracellular
score 3.689

3) NUCPRED Prediction
localization Non Nuclear
score 0.21

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.69
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) SRL1|CLD1
Function assigned as per literature SRL1 regulates leaf rolling through inhibiting the formation of bulliform cells
Subcellular localization as per literature plasma membrane
Cells used for localization experiment Onion epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 22715111
Reference of localization http://www.plantphysiol.org/content/159/4/1488.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.066
NLS score -0.47
Protein Sequence >LOC_Os07g01240.1 protein
MGMAPAGRLLLISCLLCVPNSFGFAFAVEEEEDGSGLMPQLSPTGSPNPLVPFLAPAPLAPFFNTTPPNLSGKCSLNFTAVGDLITTTAVDCFASFAPFL
ANVICCPQLQAMLTILIGQSSKQTGSLALDPTVATYCLSDVQQLLLSQGASDELHNICSLHLSNVTEGSCPVSTVDAFEAVIDSSKLLEACHKIDPVNEC
CSRTCQNAINDASQKISFKDGGLTSYAGSPKVDSCRNVVLRWLSSRLGPSSAKQMLRQISNCNVNGVCPLSFPDTSKVAKECSGTVKNGTSCCKAMDSYV
SHLQKQSFITNLQALDCAQFLGDKLQKMNVSMNVYSSCQITLKDFSLQVLCRIWMPSSKYALGCIF

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term cellular_component
3
GO Category Cellular comBiological Processonent
GO Term plasma membrane
4
GO Category Cellular comBiological Processonent
GO Term membrane
5
GO Category Biological Process
GO Term biological_process
Presence of Splice variants YES