LOC_Os07g01090

Expression Profile

RGAP LOCUS ID LOC_Os07g01090
RAP-DB ID Os07g0100800
Function transmembrane amino acid transporter protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 13

2) CELLO Prediction
localization PlasmaMembrane
score 4.852

3) NUCPRED Prediction
localization Non Nuclear
score 0.02

4) Y-Loc Prediction
localization Nuclear
score 40.89
confidence value 0.26
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsProT3
Function assigned as per literature OsProT3 is a functional transporter of Proline and γ-aminobutyric acid
Subcellular localization as per literature Plasma Membrane
Cells used for localization experiment mesophyll protoplasts of Arabidopsis
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 31707526
Reference of localization https://thericejournal.springeropen.com/articles/10.1186/s12284-019-0341-7
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.065
NLS score -0.29
Protein Sequence >LOC_Os07g01090.1 protein
MNIDMANSDDKALISEDTAHQISADPWYQVGFVLTTGVNSAYVLGYSGSVMVPLGWIGGTCGLILAAAISLYANALLARLHEIGGKRHIRYRDLAGHIYG
RKMYSLTWALQYVNLFMINTGFIILAGQALKATYVLFRDDGVLKLPYCIALSGFVCALFAFGIPYLSALRIWLGFSTFFSLIYITIAFVLSLRDGITTPA
KDYTIPGSHSARIFTTIGAVANLVFAYNTGMLPEIQATIRPPVVKNMEKALWFQFTVGSLPLYAVTFMGYWAYGSSTSSYLLNSVKGPVWVKAMANLSAF
LQTVIALHIFASPMYEFLDTKYGSGHGGPFAIHNVMFRVGVRGGYLTVNTLVAAMLPFLGDFMSLTGALSTFPLTFVLANHMYLMVKRHKLSTLQISWHW
LNVAGFSLLSIAAAVAALRLIMVDSRTYHLFADL

GO Analysis
1
GO Category Biological Process
GO Term transport
2
GO Category Molecular Function
GO Term transporter activity
3
GO Category Cellular comBiological Processonent
GO Term membrane
4
GO Category Biological Process
GO Term cellular process
5
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants YES