LOC_Os06g51150

Expression Profile

RGAP LOCUS ID LOC_Os06g51150
RAP-DB ID Os06g0727200
Function catalase isozyme B, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization pero
score 8

2) CELLO Prediction
localization Peroxisomal
score 4.135

3) NUCPRED Prediction
localization Non Nuclear
score 0.13

4) Y-Loc Prediction
localization Cytoplasm
score 78
confidence value 0.18
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCATB
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.114
NLS score -0.47
Protein Sequence >LOC_Os06g51150.1 protein
MDPYKHRPSSGSNSTFWTTNSGAPVWNNNSALTVGERGPILLEDYHLIEKLAQFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVI
VRFSTVVHERGSPETLRDPRGFAVKFYTREGNFDLVGNNMPVFFIRDGMKFPDMVHAFKPSPKTNMQENWRIVDFFSHHPESLHMFSFLFDDVGIPLNYR
HMEGFGVNTYTLINKDGKPHLVKFHWKPTCGVKCLLDDEAVTVGGTCHSHATKDLTDSIAAGNYPEWKLYIQTIDPDHEDRFDFDPLDVTKTWPEDIIPL
QPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGIHYSDDKLLQTRIFSYADTQRHRLGPNYLMLPVNAPKCAYHNNHHDGSMNFMHRDEEVNYFPSRFDAA
RHAEKVPIPPRVLTGCREKCVIDKENNFQQAGERYRSFDPARQDRFLQRWVDALSDPRITHELRGIWISYWSQCDASLGQKLASRLNLKPNM

GO Analysis
1
GO Category Biological Process
GO Term response to abiotic stimulus
2
GO Category Cellular comBiological Processonent
GO Term peroxisome
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Biological Process
GO Term cellular homeostasis
5
GO Category Biological Process
GO Term response to extracellular stimulus
6
GO Category Biological Process
GO Term cell communication
7
GO Category Biological Process
GO Term response to stress
8
GO Category Molecular Function
GO Term catalytic activity
9
GO Category Molecular Function
GO Term protein binding
10
GO Category Cellular comBiological Processonent
GO Term mitochondrion
11
GO Category Cellular comBiological Processonent
GO Term plastid
12
GO Category Biological Process
GO Term cell death
13
GO Category Molecular Function
GO Term binding
14
GO Category Biological Process
GO Term catabolic process
15
GO Category Biological Process
GO Term cellular process
16
GO Category Cellular comBiological Processonent
GO Term ribosome
17
GO Category Cellular comBiological Processonent
GO Term cytosol
Presence of Splice variants YES