LOC_Os06g50920

Expression Profile

RGAP LOCUS ID LOC_Os06g50920
RAP-DB ID Os06g0724900
Function protein kinase family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 11

2) CELLO Prediction
localization Cytoplasmic
score 3.518

3) NUCPRED Prediction
localization Non Nuclear
score 0.11

4) Y-Loc Prediction
localization Nuclear
score 70.91
confidence value 0.44
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) ILA1
Function assigned as per literature key factor regulating mechanical tissue formation at the leaf lamina joint
Subcellular localization as per literature cytoplasm and the nucleus, with a majority in the nucleus
Cells used for localization experiment rice protoplast
NUCLEAR or Not Nuclear NUCLEAR
PMID 22207574
Reference of localization http://www.plantcell.org/content/23/12/4334
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.112
NLS score 0.15
Protein Sequence >LOC_Os06g50920.1 protein
MDHGGQVSPVPATATAPRKVRREHMRLGVYHDVLQRLRDAGAPEALAPDFAEKLWTHFHRFNASYAMDVNVERAEDVLMHMKLLEKAIHPENQPAFSVRI
VQVPLDIDASEADSQSNITEDDNCPTPRTPAEHPAPIFGSTTALKALVRQASSKNLLDDNQDIDAILRPMHEITFASDDKPKGLTQLSSLLGNLNLDIKE
VHALSTNDGYFLDIFIVIGWDHKETQLLEEALEKEIHNYEPQMPSKSSCWPPELAGKQSLINSQVNHVQIPKDNTDEWEINFDVLDIQEKVASGTYGDLY
RGTYFGEDVAIKVLKSDRLNENMQEEFNEEVFIMRKIRHKNIVRFLGACTKSPTLCIVTEFMKNGSVYDYLHKRKGSFKLPSLLKAAVDISKGMNYLHQN
KIIHRDLKTANLLMDEHELIKVADFGVARVKAESGIMTAETGTYRWMAPEVIEHKPYDSKADVFSFGVVLWELLTGKIPHEFLTPLQAAIGVVQEGLRPV
IPKATDPKLALLLESCWQQNAVNRPDFVQILQKLDEIAGEHGIDLTHPHKEKEKGGFFTFGKVH

GO Analysis
1
GO Category Molecular Function
GO Term kinase activity
2
GO Category Cellular comBiological Processonent
GO Term cytosol
3
GO Category Biological Process
GO Term protein modification process
4
GO Category Biological Process
GO Term cellular component organization
5
GO Category Biological Process
GO Term cellular process
Presence of Splice variants No