LOC_Os06g50060

Expression Profile

RGAP LOCUS ID LOC_Os06g50060
RAP-DB ID Os06g0714600
Function ras-related protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 8

2) CELLO Prediction
localization Cytoplasmic
score 1.598

3) NUCPRED Prediction
localization Non Nuclear
score 0.14

4) Y-Loc Prediction
localization Cytoplasm
score 99
confidence value 0.98
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPRA2
Function assigned as per literature OsPRA2 regulates OsBRI1
Subcellular localization as per literature OsPRA2 colocalize with OsBRI1 at Plasma membrane
Cells used for localization experiment  rice protoplast
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 28402719
Reference of localization https://www.tandfonline.com/doi/full/10.1080/15592324.2016.1257455
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.116
NLS score -0.47
Protein Sequence >LOC_Os06g50060.1 protein
MEEEDYVFKVVVIGDSAVGKTQLLGRFTKDEFFIDSKSTIGIEFQTRTVEIGGKRVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDVTSRRSFHHAAR
WLHDLRAHADNSIVVMLIGNKADLSHARAVAADEAAAFAEDQGLFFSEASALSGDNVEEAFLGLLREIHAIVSRRSLLEMDGINGDAAANANAALMLRGT
KLSLSDELSIMETSAIKRVSRCSCS

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term endosome
2
GO Category Cellular comBiological Processonent
GO Term nucleus
3
GO Category Cellular comBiological Processonent
GO Term cytoplasm
4
GO Category Biological Process
GO Term signal transduction
5
GO Category Molecular Function
GO Term nucleotide binding
6
GO Category Biological Process
GO Term transport
Presence of Splice variants No