| RGAP LOCUS ID |
LOC_Os06g49470 |
| RAP-DB ID |
Os06g0708400 |
| Function |
peptidyl-prolyl cis-trans isomerase, putative, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
vacu |
| score |
5 |
2) CELLO
Prediction
|
| localization |
Extracellular |
| score |
1.154 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.03 |
4) Y-Loc
Prediction
|
| localization |
Mitochondrion |
| score |
|
| confidence value |
0.2 |
| Number Of Software Predicting Nucleus |
0 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
OsCYP19-4 |
| Function assigned as per literature |
OsCYP19-4 confers cold tolerance and enhances grain yield in rice |
| Subcellular localization as per literature |
Apoplast |
| Cells used for localization experiment |
Epidermal cells and protoplasts of Nicotiana benthamiana |
| NUCLEAR or Not Nuclear |
NOT NUCLEAR |
| PMID |
26453745 |
| Reference of localization |
https://academic.oup.com/jxb/article/67/1/69/2884959 |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
0 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.111 |
| NLS score |
-0.47 |
| Protein Sequence |
>LOC_Os06g49470.1 protein
MAARETSRHASLCLWLALVAATLSLAQAVESEAELTKVTTKVFFDITINGKPAGRIVMGLFGNTVPKTAENFRAICTGEKGLGKSGKPLSYKGTPFHRII
PGFMIQGGDTVSGNGTGCDSIYGGMFPDENFKINHSAPGLLSMANYAKDTNGSQFFITTVKLTRLDGKHVVFGKVLSGMDVVYKIEAEGSQSGTPRSKVL
ISDSGELK |
GO Analysis |
| 1 |
| GO Category |
Biological Process |
| GO Term |
protein metabolic process |
|
| 2 |
| GO Category |
Biological Process |
| GO Term |
cellular process |
|
| 3 |
| GO Category |
Molecular Function |
| GO Term |
catalytic activity |
|
| 4 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cellular_component |
|
| 5 |
| GO Category |
Biological Process |
| GO Term |
protein modification process |
|
| 6 |
| GO Category |
Biological Process |
| GO Term |
multicellular organismal development |
|
| 7 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
plastid |
|
| Presence of Splice variants |
No |
