LOC_Os06g49130

Expression Profile

RGAP LOCUS ID LOC_Os06g49130
RAP-DB ID Os06g0704800
Function TAZ zinc finger family protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 12

2) CELLO Prediction
localization Nuclear
score 4.111

3) NUCPRED Prediction
localization Non Nuclear
score 0.75

4) Y-Loc Prediction
localization Nuclear
score 99.63
confidence value 0.86
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category TAZ

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) HAC704
Function assigned as per literature
Subcellular localization as per literature Nucleus and cytosol
Cells used for localization experiment Arabidopsis protoplast
NUCLEAR or Not Nuclear NUCLEAR
PMID 22894565
Reference of localization https://bmcplantbiol.biomedcentral.com/articles/10.1186/1471-2229-12-145
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.111
NLS score 0.29
Protein Sequence >LOC_Os06g49130.1 protein
MKQGQGAHLSGQRIGHHPTAQMNPGDGDGNGRHQVASGHASADPELMNLRIRMTNRIWELLSREPKLQTRPRKLVSDLAKRFEAVIYKKNPNKAAYYSIL
NGEIFPHLQHALSTHMAQHQQGQQMLQQLTSSSSYGTTIPIPDVVQNASGNTRALYEMDNTSGPMSNGHHHFSANFPLHSTTKGASLEMSAVSMQEGKIT
HMIPTPGSSNQQSLPGNFHYSTGTGYLNGKSNVMAQMQEQQAPFASKINCCPVQRDLGGYAGSGVHSDILNNSSPYGVSEAHMIDGMGLHRSNVQVINRT
VVPETFINPSPYGISPNKPLQRHVNPSTRSTPTPADIAASTSFNGTGSSALSTTSYLDMTTVNSLPKSRMDSGLIMSQPTIQSFQTEYYIQTEGLDLQEK
ISLEQLHQQVNQLHLIQPHSQYAQNQCSLKLQQQNSLHHLVMSRGNVLTQCHLGSDHAEKLLDKRNQLHSELVSSQINEHVGLTNLQGHYEQTQYHDNYK
KGQMSASSQNLGIPAPHDLLPPQQQFDDGSYRLSCFLKETYTKPLQPHCKSKPMKEVIMTSLLSGKIQDGFCQKKMARDREHHPIISGWHSAGCAATSFG
SEEVMENTKQYHAQARWLLFLFHAKSCTSPPGSCKSSYCDRVRELVVHLTDCQIKDCSYRHCRESKMVSDHYKNCINEHCHVCCKAKEMLRRSSELAHKQ
NPAEPILITQHNMNQRSADRVHGDRMDIDQAVETFDDQPPAAKRPKLQLVSPDASENVPVCQKNPGFMLQEAHPRQLDQNKKMVPDQEVDVGLDIRHPQV
TLVSCHGSDEKIGAAQNTVIPGALNKIHCHVQQETVVADKESVTVVDVKKKTGSVDVTISKTGKPKVKGVSLMELFTPEQIHEHINSLRQWIGQWVQCDK
CECWQHQICALFNARRNDVEEAEYTCFKCYIEEFKRGLRMPLPESVVRGAKDLPRTLLSDHIEERLFKRLREERQERANKLKTSLDEVPGADGLVVRVVS
SVDKKLEVKPHFFKILQEDNYPAEFPYKSKAILLFQKIEGVEVCLFGMYVQEYGAECKFPNQRRVYLSYLDSVKYFRPDIETVSGQALRTYVYHEILIGY
LEYYKQRGFTSCYIWACPPVKGEDYILYCHPEIQKTPKSDKLRQWYLSMLQKAIKENIVVELTNLYDQFFVTAKECKIKVSAARLPYFDGDYWPGAAEDI
INQLQLEGDGKLLKKGRVNKIITKRALKAAGHTDLSGNASKEAMLMQKLGEIICPIKDDLIMVHLQYSCSHCCTFMVSGRRWVCNECKSFYICDRCYNAE
QRLEEKERHPSNSKCLHILHPVEIVGVSEDTKDRDIILENEIFDTRQAFLSFCQGYHYQYDTLRRAKHSTMMMLYHLHNPTGPAFVATCNVCNCDIENGQ
GWYCKDCPDFDMCASCYQKHEVPIIITS

GO Analysis
1
GO Category Biological Process
GO Term flower development
2
GO Category Cellular comBiological Processonent
GO Term nucleus
3
GO Category Biological Process
GO Term biosynthetic process
4
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
5
GO Category Molecular Function
GO Term transferase activity
6
GO Category Molecular Function
GO Term molecular_function
7
GO Category Biological Process
GO Term cellular component organization
8
GO Category Biological Process
GO Term protein modification process
Presence of Splice variants YES